| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAVQHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPDGAPLPDAPPPSPLYTPPPPSSPEWTRPSTNYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPKDNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9456 | |
| 2 | L | A | 1.9647 | |
| 3 | P | A | 0.8318 | |
| 4 | P | A | 0.3757 | |
| 5 | T | A | 0.1220 | |
| 6 | T | A | 0.1315 | |
| 7 | P | A | 0.1900 | |
| 8 | V | A | 1.2100 | |
| 9 | A | A | 0.0774 | |
| 10 | K | A | -1.0471 | |
| 11 | V | A | -0.2066 | |
| 12 | Q | A | -1.4281 | |
| 13 | S | A | -1.5651 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4100 | |
| 16 | E | A | -2.4366 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4632 | |
| 20 | P | A | 0.1320 | |
| 21 | T | A | 0.1801 | |
| 22 | S | A | -0.0944 | |
| 23 | L | A | 0.0937 | |
| 24 | F | A | -0.0221 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3024 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9097 | |
| 31 | R | A | -2.6934 | |
| 32 | L | A | -0.8088 | |
| 33 | L | A | 1.1585 | |
| 34 | T | A | 1.3823 | |
| 35 | V | A | 1.8652 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2101 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6313 | |
| 40 | K | A | -1.6300 | |
| 41 | D | A | -0.9099 | |
| 42 | I | A | 0.8384 | |
| 43 | V | A | 1.0159 | |
| 44 | K | A | -1.1835 | |
| 45 | N | A | -1.9348 | |
| 46 | G | A | -1.2406 | |
| 47 | K | A | -0.9860 | |
| 48 | V | A | 1.4201 | |
| 49 | V | A | 2.0220 | |
| 50 | V | A | 1.2483 | |
| 51 | P | A | 0.4364 | |
| 52 | K | A | -0.6357 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1578 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3973 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2634 | |
| 70 | K | A | -1.7827 | |
| 71 | F | A | -0.6292 | |
| 72 | A | A | -0.5788 | |
| 73 | L | A | -0.8701 | |
| 74 | P | A | -1.2144 | |
| 75 | Q | A | -2.5036 | |
| 76 | K | A | -3.1070 | |
| 77 | D | A | -2.9835 | |
| 78 | F | A | -1.6686 | |
| 79 | Y | A | -1.8716 | |
| 80 | D | A | -2.6662 | |
| 81 | P | A | -2.2963 | |
| 82 | E | A | -3.0436 | |
| 83 | K | A | -3.3882 | |
| 84 | E | A | -2.4520 | |
| 85 | R | A | -1.2864 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6341 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9718 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3676 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6947 | |
| 99 | G | A | -0.5272 | |
| 100 | P | A | -0.3756 | |
| 101 | L | A | 0.1018 | |
| 102 | G | A | -0.1589 | |
| 103 | K | A | -0.5671 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4088 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1436 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4090 | |
| 110 | L | A | 0.2727 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1129 | |
| 113 | K | A | -0.2952 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -0.9537 | |
| 116 | D | A | -1.1809 | |
| 117 | T | A | -0.8706 | |
| 118 | E | A | -1.6899 | |
| 119 | N | A | -1.9118 | |
| 120 | P | A | -1.0332 | |
| 121 | T | A | -0.3949 | |
| 122 | A | A | 0.3368 | |
| 123 | V | A | 1.0951 | |
| 124 | Q | A | -0.6319 | |
| 125 | H | A | -1.9490 | |
| 126 | E | A | -2.8336 | |
| 127 | G | A | -2.2844 | |
| 128 | A | A | -1.5552 | |
| 129 | D | A | -2.4345 | |
| 130 | D | A | -2.0806 | |
| 131 | R | A | -1.0598 | |
| 132 | V | A | 0.2653 | |
| 133 | A | A | 0.4552 | |
| 134 | F | A | 0.2868 | |
| 135 | S | A | -0.0595 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4414 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2777 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5720 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1956 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1841 | |
| 157 | D | A | 0.3544 | |
| 158 | L | A | 0.8059 | |
| 159 | A | A | 0.1811 | |
| 160 | E | A | -1.4548 | |
| 161 | P | A | -0.2152 | |
| 162 | C | A | 0.1902 | |
| 163 | P | A | -0.1681 | |
| 164 | G | A | -0.0762 | |
| 165 | L | A | 0.5923 | |
| 166 | P | A | -0.1154 | |
| 167 | P | A | -0.3399 | |
| 168 | G | A | -0.4524 | |
| 169 | A | A | 0.0914 | |
| 170 | C | A | 0.7934 | |
| 171 | P | A | 0.5378 | |
| 172 | P | A | 0.8636 | |
| 173 | I | A | 2.0360 | |
| 174 | Q | A | 0.8881 | |
| 175 | L | A | 1.5198 | |
| 176 | V | A | 0.8746 | |
| 177 | N | A | -0.2942 | |
| 178 | S | A | 0.0230 | |
| 179 | V | A | 0.4216 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3854 | |
| 182 | D | A | 0.0796 | |
| 183 | G | A | -0.1575 | |
| 184 | D | A | -0.5460 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4698 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0555 | |
| 190 | F | A | 0.0203 | |
| 191 | G | A | -0.1539 | |
| 192 | N | A | -0.3048 | |
| 193 | M | A | -0.1192 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3776 | |
| 197 | E | A | -2.5669 | |
| 198 | L | A | -1.2104 | |
| 199 | Q | A | -2.5539 | |
| 200 | Q | A | -3.3022 | |
| 201 | D | A | -3.5739 | |
| 202 | R | A | -3.3370 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1994 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3374 | |
| 211 | S | A | -1.8706 | |
| 212 | T | A | -1.4128 | |
| 213 | R | A | -2.0716 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1973 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3672 | |
| 220 | L | A | 0.5994 | |
| 221 | K | A | -1.1222 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8153 | |
| 224 | N | A | -1.4929 | |
| 225 | E | A | -1.2287 | |
| 226 | A | A | -0.6062 | |
| 227 | Y | A | -0.3565 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6788 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0719 | |
| 234 | F | A | 0.2501 | |
| 235 | G | A | -0.8325 | |
| 236 | R | A | -2.6290 | |
| 237 | R | A | -2.9405 | |
| 238 | E | A | -2.2246 | |
| 239 | Q | A | -0.2616 | |
| 240 | V | A | 1.3854 | |
| 241 | Y | A | 1.1131 | |
| 242 | A | A | 0.2370 | |
| 243 | R | A | -0.8820 | |
| 244 | H | A | -0.8762 | |
| 245 | F | A | 0.0811 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.0611 | |
| 248 | R | A | -0.5316 | |
| 249 | C | A | -1.2473 | |
| 250 | G | A | -1.0664 | |
| 251 | P | A | -1.0662 | |
| 252 | D | A | -1.0558 | |
| 253 | G | A | -0.7339 | |
| 254 | A | A | -0.3723 | |
| 255 | P | A | -0.9101 | |
| 256 | L | A | -0.2611 | |
| 257 | P | A | -0.7269 | |
| 258 | D | A | -1.8986 | |
| 259 | A | A | -0.8811 | |
| 260 | P | A | -0.9274 | |
| 261 | P | A | -0.6243 | |
| 262 | P | A | -0.3237 | |
| 263 | S | A | -0.1882 | |
| 264 | P | A | 0.3952 | |
| 265 | L | A | 1.4971 | |
| 266 | Y | A | 0.6219 | |
| 267 | T | A | 0.0806 | |
| 268 | P | A | -0.3188 | |
| 269 | P | A | -0.4611 | |
| 270 | P | A | -0.5101 | |
| 271 | P | A | -0.5219 | |
| 272 | S | A | -0.7286 | |
| 273 | S | A | -0.9287 | |
| 274 | P | A | -1.1750 | |
| 275 | E | A | -1.7732 | |
| 276 | W | A | -0.7457 | |
| 277 | T | A | -1.3226 | |
| 278 | R | A | -1.3257 | |
| 279 | P | A | -1.0156 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.3290 | |
| 282 | N | A | -0.3661 | |
| 283 | Y | A | 1.0194 | |
| 284 | F | A | 0.7340 | |
| 285 | G | A | 0.2252 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9090 | |
| 291 | L | A | 1.6082 | |
| 292 | V | A | 0.6376 | |
| 293 | S | A | -0.1483 | |
| 294 | S | A | -0.9520 | |
| 295 | D | A | -1.8431 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1032 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6340 | |
| 301 | R | A | -1.8449 | |
| 302 | P | A | -0.9710 | |
| 303 | F | A | -0.1846 | |
| 304 | W | A | -0.5575 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0800 | |
| 307 | R | A | -2.8304 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2558 | |
| 310 | G | A | -1.2248 | |
| 311 | N | A | -1.2806 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8561 | |
| 319 | N | A | -0.8596 | |
| 320 | E | A | -1.0455 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3043 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0388 | |
| 333 | N | A | 0.5872 | |
| 334 | F | A | 1.7636 | |
| 335 | T | A | 0.8719 | |
| 336 | I | A | 0.4336 | |
| 337 | S | A | -0.9736 | |
| 338 | Q | A | -1.7682 | |
| 339 | Q | A | -1.4001 | |
| 340 | L | A | 0.6202 | |
| 341 | C | A | 0.2345 | |
| 342 | T | A | -0.3559 | |
| 343 | P | A | -0.9644 | |
| 344 | K | A | -2.3435 | |
| 345 | D | A | -2.4797 | |
| 346 | N | A | -1.6138 | |
| 347 | V | A | 0.4539 | |
| 348 | Y | A | 0.9048 | |
| 349 | D | A | -0.3160 | |
| 350 | P | A | -0.4108 | |
| 351 | S | A | -0.3337 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.8312 | |
| 354 | K | A | -1.8121 | |
| 355 | N | A | -1.7857 | |
| 356 | Y | A | -0.0945 | |
| 357 | L | A | 0.6496 | |
| 358 | R | A | 0.9853 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4023 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0875 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0748 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6925 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3004 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3080 | |
| 376 | L | A | -1.7054 | |
| 377 | D | A | -1.9874 | |
| 378 | P | A | -1.0374 | |
| 379 | G | A | -1.0129 | |
| 380 | V | A | -0.9334 | |
| 381 | L | A | -0.5294 | |
| 382 | A | A | -0.6524 | |
| 383 | H | A | -0.8105 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4029 | |
| 386 | T | A | -0.5500 | |
| 387 | M | A | -0.2973 | |
| 388 | N | A | -0.8610 | |
| 389 | P | A | -1.2520 | |
| 390 | T | A | -1.4756 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4645 | |
| 393 | E | A | -2.8081 | |
| 394 | N | A | -2.4468 | |
| 395 | W | A | -1.4116 | |
| 396 | N | A | -1.1216 | |
| 397 | L | A | -0.1981 | |
| 398 | G | A | 0.5195 | |
| 399 | F | A | 2.4173 | |
| 400 | V | A | 1.8190 | |
| 401 | P | A | 0.0508 | |
| 402 | P | A | -1.8766 | |
| 403 | K | A | -3.3553 | |
| 404 | E | A | -3.8278 | |
| 405 | R | A | -4.0258 | |
| 406 | E | A | -3.8402 | |
| 407 | D | A | -2.9039 | |
| 408 | P | A | -1.7803 | |
| 409 | Y | A | -0.9884 | |
| 410 | K | A | -2.1201 | |
| 411 | G | A | -0.6391 | |
| 412 | L | A | 0.6766 | |
| 413 | I | A | 1.5913 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3802 | |
| 416 | E | A | -1.6705 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9555 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0628 | |
| 421 | E | A | -2.8034 | |
| 422 | R | A | -2.6060 | |
| 423 | F | A | -1.2965 | |
| 424 | S | A | -1.4764 | |
| 425 | Q | A | -1.7364 | |
| 426 | D | A | -2.8985 | |
| 427 | L | A | -1.9861 | |
| 428 | D | A | -2.7717 | |
| 429 | Q | A | -2.6106 | |
| 430 | F | A | -1.4124 | |
| 431 | A | A | -0.8967 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5927 | |
| 435 | K | A | -0.7186 | |
| 436 | F | A | 0.1440 | |
| 437 | L | A | 1.0238 | |
| 438 | Y | A | 0.8211 | |
| 439 | Q | A | -0.2801 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine