| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGFSFGDSDMAWVRQAPGKGLEWVSRITSDGSSTDYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKTEELLYQNSIDDWGQGTLVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30)
[INFO] Main: Simulation completed successfully. (00:00:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0502 | |
| 2 | V | H | -1.3326 | |
| 3 | Q | H | -1.2748 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.2185 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2193 | |
| 8 | G | H | -0.8033 | |
| 9 | G | H | 0.0330 | |
| 10 | G | H | 0.5475 | |
| 11 | L | H | 1.2961 | |
| 12 | V | H | 0.0000 | |
| 13 | Q | H | -1.4556 | |
| 14 | P | H | -1.6900 | |
| 15 | G | H | -1.4941 | |
| 16 | G | H | -1.0878 | |
| 17 | S | H | -1.3111 | |
| 18 | L | H | -1.0053 | |
| 19 | R | H | -2.0724 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.3676 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.0565 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.9786 | |
| 26 | G | H | -1.2396 | |
| 27 | F | H | -0.9862 | |
| 28 | S | H | -1.0429 | |
| 29 | F | H | 0.0000 | |
| 30 | G | H | -2.2404 | |
| 31 | D | H | -2.6490 | |
| 32 | S | H | 0.0000 | |
| 33 | D | H | 0.0000 | |
| 34 | M | H | 0.0000 | |
| 35 | A | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.3220 | |
| 40 | A | H | -0.9627 | |
| 41 | P | H | -0.9218 | |
| 42 | G | H | -1.5628 | |
| 43 | K | H | -2.0936 | |
| 44 | G | H | -0.9739 | |
| 45 | L | H | 0.6005 | |
| 46 | E | H | -0.2675 | |
| 47 | W | H | 0.3898 | |
| 48 | V | H | 0.0000 | |
| 49 | S | H | 0.0000 | |
| 50 | R | H | -0.5525 | |
| 51 | I | H | 0.0000 | |
| 52 | T | H | -1.2138 | |
| 52A | S | H | -2.0291 | |
| 53 | D | H | -2.6268 | |
| 54 | G | H | -1.5547 | |
| 55 | S | H | -0.9636 | |
| 56 | S | H | -0.8705 | |
| 57 | T | H | -0.7361 | |
| 58 | D | H | -1.4259 | |
| 59 | Y | H | -1.3439 | |
| 60 | A | H | -1.5547 | |
| 61 | D | H | -2.6118 | |
| 62 | S | H | -1.7479 | |
| 63 | V | H | 0.0000 | |
| 64 | K | H | -2.7770 | |
| 65 | G | H | -1.7632 | |
| 66 | R | H | -1.5003 | |
| 67 | F | H | 0.0000 | |
| 68 | T | H | -0.9280 | |
| 69 | I | H | 0.0000 | |
| 70 | S | H | -0.4774 | |
| 71 | R | H | -1.2846 | |
| 72 | D | H | -1.8676 | |
| 73 | N | H | -2.6643 | |
| 74 | S | H | -1.8192 | |
| 75 | K | H | -2.4959 | |
| 76 | N | H | -1.9692 | |
| 77 | T | H | 0.0000 | |
| 78 | L | H | 0.0000 | |
| 79 | Y | H | -0.4567 | |
| 80 | L | H | 0.0000 | |
| 81 | Q | H | -1.1160 | |
| 82 | M | H | 0.0000 | |
| 82A | N | H | -1.3924 | |
| 82B | S | H | -1.2385 | |
| 82C | L | H | 0.0000 | |
| 83 | R | H | -2.3511 | |
| 84 | A | H | -1.7619 | |
| 85 | E | H | -2.2342 | |
| 86 | D | H | 0.0000 | |
| 87 | T | H | -0.4312 | |
| 88 | A | H | 0.0000 | |
| 89 | V | H | 0.9173 | |
| 90 | Y | H | 0.0000 | |
| 91 | Y | H | 0.6745 | |
| 92 | C | H | 0.0000 | |
| 93 | A | H | 0.0000 | |
| 94 | K | H | 0.0000 | |
| 95 | T | H | 0.0000 | |
| 96 | E | H | -1.9031 | |
| 97 | E | H | -0.9411 | |
| 98 | L | H | 0.6270 | |
| 99 | L | H | 1.8710 | |
| 100 | Y | H | 1.4858 | |
| 100A | Q | H | -0.1193 | |
| 100B | N | H | -1.1093 | |
| 100C | S | H | -0.9592 | |
| 100D | I | H | -1.0559 | |
| 101 | D | H | -2.0601 | |
| 102 | D | H | -1.3687 | |
| 103 | W | H | -0.2310 | |
| 104 | G | H | -0.1318 | |
| 105 | Q | H | -0.6272 | |
| 106 | G | H | 0.1787 | |
| 107 | T | H | 0.6299 | |
| 108 | L | H | 1.5507 | |
| 109 | V | H | 0.0000 | |
| 110 | T | H | 0.2654 | |
| 111 | V | H | 0.0000 | |
| 112 | S | H | -0.7624 | |
| 113 | S | H | -0.5849 |