| Chain sequence(s) |
A: TVQQKTHQVCPDGFDWGYGCAAGSSRFCTRHDWCCYDERADSHTYGFCTGNRVTNTYEFHADAW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:53)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | A | 0.3733 | |
| 2 | V | A | 0.6932 | |
| 3 | Q | A | -1.3339 | |
| 4 | Q | A | -2.2111 | |
| 5 | K | A | -2.5581 | |
| 6 | T | A | -1.9238 | |
| 7 | H | A | -1.8149 | |
| 8 | Q | A | -1.1731 | |
| 9 | V | A | 0.5414 | |
| 10 | C | A | -0.2860 | |
| 11 | P | A | -0.9367 | |
| 12 | D | A | -2.0933 | |
| 13 | G | A | -1.6961 | |
| 14 | F | A | -1.0759 | |
| 15 | D | A | -0.8732 | |
| 16 | W | A | 0.4159 | |
| 17 | G | A | 0.9646 | |
| 18 | Y | A | 1.5979 | |
| 19 | G | A | 0.0000 | |
| 20 | C | A | 0.0000 | |
| 21 | A | A | -0.4988 | |
| 22 | A | A | -0.6677 | |
| 23 | G | A | -0.6771 | |
| 24 | S | A | -0.3703 | |
| 25 | S | A | -0.6440 | |
| 26 | R | A | -1.0937 | |
| 27 | F | A | 0.6536 | |
| 28 | C | A | -0.1694 | |
| 29 | T | A | -0.6718 | |
| 30 | R | A | -1.9975 | |
| 31 | H | A | -0.9740 | |
| 32 | D | A | 0.0289 | |
| 33 | W | A | 1.3091 | |
| 34 | C | A | 0.0000 | |
| 35 | C | A | 0.0000 | |
| 36 | Y | A | -0.0559 | |
| 37 | D | A | 0.0000 | |
| 38 | E | A | -2.1108 | |
| 39 | R | A | -2.5380 | |
| 40 | A | A | -1.6731 | |
| 41 | D | A | -2.3672 | |
| 42 | S | A | -1.6016 | |
| 43 | H | A | -1.2163 | |
| 44 | T | A | -0.4892 | |
| 45 | Y | A | -0.0700 | |
| 46 | G | A | 0.1022 | |
| 47 | F | A | 0.3952 | |
| 48 | C | A | 0.0449 | |
| 49 | T | A | -0.4454 | |
| 50 | G | A | -1.2825 | |
| 51 | N | A | -1.8629 | |
| 52 | R | A | -1.9089 | |
| 53 | V | A | -1.0011 | |
| 54 | T | A | -1.3106 | |
| 55 | N | A | -1.7688 | |
| 56 | T | A | -0.6655 | |
| 57 | Y | A | -0.3030 | |
| 58 | E | A | -0.9871 | |
| 59 | F | A | 0.5694 | |
| 60 | H | A | -0.9142 | |
| 61 | A | A | -0.8787 | |
| 62 | D | A | -1.4883 | |
| 63 | A | A | -0.3234 | |
| 64 | W | A | 0.8195 |