Chain sequence(s) |
A: PATLYAVVENVPPLRWKEFVKRLGLSDHEIDRLELQNGRCLREAQYSMLATWRRRTPRREATLELLGRVLRDMDLLGCLEDIEEALC
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | KR347A |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.0811723 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:01:45) [INFO] FoldX: Starting FoldX energy minimalization (00:02:39) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:28) [INFO] Main: Simulation completed successfully. (00:03:28) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
327 | P | A | 0.1189 | |
328 | A | A | 0.5171 | |
329 | T | A | -0.1210 | |
330 | L | A | 0.0000 | |
331 | Y | A | 0.3379 | |
332 | A | A | 0.0000 | |
333 | V | A | 0.0000 | |
334 | V | A | 0.0000 | |
335 | E | A | -2.0135 | |
336 | N | A | -1.4489 | |
337 | V | A | 0.0000 | |
338 | P | A | -0.9171 | |
339 | P | A | -0.5074 | |
340 | L | A | 0.4176 | |
341 | R | A | -1.9927 | |
342 | W | A | 0.0000 | |
343 | K | A | -3.0427 | |
344 | E | A | -3.1928 | |
345 | F | A | 0.0000 | |
346 | V | A | 0.0000 | |
347 | R | A | -4.0421 | mutated: KR347A |
348 | R | A | -3.7201 | |
349 | L | A | 0.0000 | |
350 | G | A | -1.9275 | |
351 | L | A | -1.6127 | |
352 | S | A | -1.7342 | |
353 | D | A | -3.2547 | |
354 | H | A | -2.6566 | |
355 | E | A | 0.0000 | |
356 | I | A | 0.0000 | |
357 | D | A | -3.6857 | |
358 | R | A | -3.2514 | |
359 | L | A | 0.0000 | |
360 | E | A | -2.8889 | |
361 | L | A | -1.2321 | |
362 | Q | A | -2.2895 | |
363 | N | A | -2.1023 | |
364 | G | A | -2.0785 | |
365 | R | A | -2.2069 | |
366 | C | A | -1.0503 | |
367 | L | A | -0.0394 | |
368 | R | A | -1.4345 | |
369 | E | A | -1.8794 | |
370 | A | A | -1.4997 | |
371 | Q | A | 0.0000 | |
372 | Y | A | -0.3929 | |
373 | S | A | -1.1112 | |
374 | M | A | 0.0000 | |
375 | L | A | 0.0000 | |
376 | A | A | -1.0283 | |
377 | T | A | -1.5203 | |
378 | W | A | 0.0000 | |
379 | R | A | -3.3366 | |
380 | R | A | -3.6655 | |
381 | R | A | -3.2243 | |
382 | T | A | -2.4923 | |
383 | P | A | -2.6187 | |
384 | R | A | -3.5779 | |
385 | R | A | -3.7361 | |
386 | E | A | -3.4683 | |
387 | A | A | -2.1296 | |
388 | T | A | 0.0000 | |
389 | L | A | -1.3989 | |
390 | E | A | -2.2426 | |
391 | L | A | -1.7133 | |
392 | L | A | 0.0000 | |
393 | G | A | 0.0000 | |
394 | R | A | -3.5477 | |
395 | V | A | 0.0000 | |
396 | L | A | 0.0000 | |
397 | R | A | -3.7014 | |
398 | D | A | -3.7888 | |
399 | M | A | -2.6061 | |
400 | D | A | -2.9003 | |
401 | L | A | -1.9213 | |
402 | L | A | -1.6448 | |
403 | G | A | -1.7187 | |
404 | C | A | -2.1015 | |
405 | L | A | -2.6254 | |
406 | E | A | -3.4102 | |
407 | D | A | -3.6319 | |
408 | I | A | 0.0000 | |
409 | E | A | -3.0261 | |
410 | E | A | -2.9247 | |
411 | A | A | -0.9794 | |
412 | L | A | 0.0505 | |
413 | C | A | 0.0630 |