Project name: 2VXV

Status: done

Started: 2026-03-23 10:55:28
Settings
Chain sequence(s) H: EVQLVQSGTEVKKPGESLKISCCKGSGYTVTSYWIIGWVRQMPGKGLEWMGFIYPGDSETRYSPTFQGQVVTISADKSFNTAFLQWSSLKASDTAMYYCCARVGSGWYPYTFDIWGQGTMVTVSSSASSTKGPSVFPLAPSSKSTSGGTAALGCCLVKDYFPEEPVTVSWNSGALTSSGVHTFPAVVLQSSGLYSSLSSSVVTVPSSSLGTQTTYICCNVNHKPSNNTKKVDKKKVEPK
L: EIVMTQSSPATLSVSPGERATLSCCRASESSISSSNLAWYQQKPGQAPRLFIYTTASTRAATTDDIPARFSGSSGSGTEFTLTISSSSLQSSEDFAVYYCQQYNNWPSITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACCEEVTHQGLSSSPVTKSFNRGE
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:54)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:57)
Show buried residues

Minimal score value
-3.4666
Maximal score value
1.0301
Average score
-0.7015
Total score value
-305.8344

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0139
2 V H -1.0372
3 Q H -1.0909
4 L H 0.0000
5 V H 0.5983
6 Q H 0.0000
7 S H -0.4614
8 G H -0.5417
9 T H -0.2170
10 E H -0.3778
11 V H 0.0224
12 K H -1.1355
13 K H -1.8639
14 P H -1.9597
15 G H -1.8239
16 E H -1.8780
17 S H -1.6627
18 L H 0.0000
19 K H -1.9543
20 I H 0.0000
21 S H -0.4523
22 C H 0.0000
23 K H -0.5714
24 G H 0.0000
25 S H -0.7353
26 G H -1.1617
27 Y H -0.5063
28 T H -0.1570
29 V H 0.0000
30 T H -0.7883
31 S H -0.1434
32 Y H 0.2928
33 W H 0.2481
34 I H 0.0000
35 G H 0.0000
36 W H 0.0000
37 V H 0.0000
38 R H -0.6854
39 Q H -0.9015
40 M H -0.8667
41 P H -0.9566
42 G H -1.4184
43 K H -2.3501
44 G H -1.5546
45 L H 0.0000
46 E H -1.0277
47 W H -0.2702
48 M H 0.0000
49 G H 0.0000
50 F H 0.0000
51 I H 0.0000
52 Y H -0.7216
52A P H 0.0000
53 G H -1.6429
54 D H -2.4371
55 S H -1.7784
56 E H -1.4716
57 T H -0.9375
58 R H -1.0767
59 Y H -0.9074
60 S H 0.0000
61 P H -1.1519
62 T H -0.8061
63 F H 0.0000
64 Q H -1.9450
65 G H -1.6439
66 Q H -1.9194
67 V H 0.0000
68 T H -0.9131
69 I H 0.0000
70 S H -0.8318
71 A H -1.0326
72 D H -1.3745
73 K H -2.0768
74 S H -0.4847
75 F H 0.5979
76 N H -0.8627
77 T H 0.0000
78 A H 0.0000
79 F H -0.5553
80 L H 0.0000
81 Q H -1.3536
82 W H 0.0000
82A S H -1.3225
82B S H -1.5944
82C L H 0.0000
83 K H -2.3978
84 A H -1.2836
85 S H -0.7717
86 D H -0.8403
87 T H -0.3989
88 A H 0.0000
89 M H -0.0409
90 Y H 0.0000
91 Y H 0.0000
92 C H 0.0000
93 A H 0.0000
94 R H 0.0000
95 V H 0.0000
96 G H 0.0000
97 S H 0.2632
98 G H 0.1820
99 W H 1.0301
100 Y H 0.5788
100A P H 0.5303
100B Y H 0.6851
100C T H 0.0000
100D F H 0.0000
101 D H -0.1385
102 I H -0.3842
103 W H 0.0000
104 G H 0.0000
105 Q H -1.2545
106 G H -0.6815
107 T H 0.0000
108 M H 0.0561
109 V H 0.0000
110 T H -0.4041
111 V H 0.0000
112 S H -0.8743
113 S H -0.9501
114 A H -0.5211
115 S H -0.6060
116 T H -0.6961
117 K H -1.1780
118 G H -1.4727
119 P H 0.0000
120 S H -0.3950
121 V H 0.0000
122 F H 0.0000
123 P H -1.0653
124 L H 0.0000
125 A H -1.1694
126 P H 0.0000
127 S H -1.2530
128 S H -1.4860
129 K H -1.9235
130 S H -1.1737
131 T H -0.9393
132 S H -0.8808
133 G H -0.7938
134 G H -0.6130
135 T H -0.4610
136 A H 0.0000
137 A H 0.0000
138 L H 0.0000
139 G H 0.0000
140 C H 0.0000
141 L H 0.0000
142 V H 0.0000
143 K H 0.0000
144 D H -0.4496
145 Y H 0.0000
146 F H 0.0000
147 P H 0.0000
148 E H -1.4404
149 P H -1.3322
150 V H -0.9389
151 T H -0.6595
152 V H -0.2004
153 S H -0.3661
154 W H 0.0000
155 N H -0.6984
156 S H -0.6393
157 G H -0.5670
158 A H -0.2396
159 L H 0.0229
160 T H -0.1673
161 S H -0.1832
162 G H -0.2299
163 V H 0.1439
164 H H -0.3183
165 T H 0.0103
166 F H 0.0000
167 P H -0.3290
168 A H 0.0184
169 V H 0.4844
170 L H 0.8843
171 Q H 0.1981
172 S H -0.0927
173 S H -0.2268
174 G H -0.0336
175 L H -0.1029
176 Y H 0.0000
177 S H 0.0000
178 L H 0.0000
179 S H 0.0000
180 S H 0.0000
181 V H 0.0000
182 V H 0.0000
183 T H -0.1270
184 V H 0.0000
185 P H -0.6009
186 S H -0.7549
187 S H -0.7126
188 S H -0.6470
189 L H -0.8225
190 G H -0.9714
191 T H -0.7221
192 Q H -1.2259
193 T H -1.1003
194 Y H 0.0000
195 I H -1.1322
196 C H 0.0000
197 N H -1.3716
198 V H 0.0000
199 N H -1.9264
200 H H 0.0000
201 K H -2.8926
202 P H -1.8492
203 S H -1.8684
204 N H -2.6406
205 T H -2.0455
206 K H -2.6336
207 V H -1.3274
208 D H -2.3929
209 K H -1.8390
210 K H -2.4283
211 V H 0.0000
212 E H -2.8026
213 P H -1.9409
214 K H -2.2671
1 E L -1.5230
2 I L -0.3431
3 V L 0.7535
4 M L 0.0000
5 T L -0.5320
6 Q L 0.0000
7 S L -0.5851
8 P L -0.1998
9 A L -0.2556
10 T L -0.0587
11 L L 0.0002
12 S L -0.4841
13 V L 0.0000
14 S L -1.7618
15 P L -1.7367
16 G L -2.0128
17 E L -2.9493
18 R L -2.9297
19 A L 0.0000
20 T L -0.5207
21 L L 0.0000
22 S L -0.7965
23 C L 0.0000
24 R L -2.0487
25 A L 0.0000
26 S L -1.1660
27 E L -2.2587
28 S L -1.6756
29 I L 0.0000
30 S L -1.0113
31 S L -0.7688
32 N L -0.6652
33 L L 0.0000
34 A L 0.0000
35 W L 0.0000
36 Y L 0.0000
37 Q L 0.0000
38 Q L 0.0000
39 K L -1.5456
40 P L -1.3365
41 G L -1.4532
42 Q L -2.1783
43 A L -1.5565
44 P L 0.0000
45 R L -1.9255
46 L L 0.0000
47 F L 0.0000
48 I L 0.0000
49 Y L -0.1484
50 T L -0.2892
51 A L 0.0000
52 S L -0.6848
53 T L -0.6521
54 R L -1.4022
55 A L -1.0967
56 T L -1.1983
57 D L -2.0060
58 I L 0.0000
59 P L -0.8207
60 A L -0.6190
61 R L -0.7963
62 F L 0.0000
63 S L -0.6394
64 G L -0.5442
65 S L -0.7584
66 G L -1.1920
67 S L -1.1792
68 G L -1.4158
69 T L -1.9684
70 E L -2.5635
71 F L 0.0000
72 T L -0.7986
73 L L 0.0000
74 T L -0.6574
75 I L 0.0000
76 S L -1.6950
77 S L -1.8894
78 L L 0.0000
79 Q L -1.6580
80 S L -1.4160
81 E L -2.1183
82 D L 0.0000
83 F L -0.5346
84 A L 0.0000
85 V L -0.0320
86 Y L 0.0000
87 Y L 0.0000
88 C L 0.0000
89 Q L 0.0000
90 Q L 0.0000
91 Y L 0.0000
92 N L -1.3391
93 N L -1.4442
94 W L -0.5508
95 P L -0.4493
95A S L -1.0452
96 I L 0.0000
97 T L -0.1296
98 F L 0.1097
99 G L 0.0000
100 Q L -1.3725
101 G L 0.0000
102 T L 0.0000
103 R L -0.2908
104 L L 0.0000
105 E L 0.0000
106 I L -0.8482
107 K L -1.3610
108 R L -1.1173
109 T L -0.1409
110 V L 0.3954
111 A L 0.0110
112 A L -0.1299
113 P L 0.0000
114 S L -0.1818
115 V L 0.0000
116 F L 0.1560
117 I L 0.1486
118 F L 0.0000
119 P L -0.3950
120 P L 0.0000
121 S L -1.7735
122 D L -2.9025
123 E L -2.9802
124 Q L 0.0000
125 L L -2.3054
126 K L -2.7891
127 S L -1.7379
128 G L -1.3926
129 T L -0.8858
130 A L 0.0000
131 S L 0.0000
132 V L 0.0000
133 V L 0.0000
134 C L 0.0000
135 L L 0.0000
136 L L 0.0000
137 N L 0.0000
138 N L -0.9882
139 F L 0.0000
140 Y L 0.0000
141 P L -1.3833
142 R L -2.2480
143 E L -2.7832
144 A L -1.9618
145 K L -1.9409
146 V L -0.7679
147 Q L -0.5286
148 W L 0.0000
149 K L -0.7868
150 V L 0.0000
151 D L -1.7632
152 N L -1.5771
153 A L -0.5428
154 L L 0.1393
155 Q L -0.6330
156 S L -0.8182
157 G L -1.3472
158 N L -1.7344
159 S L -1.4792
160 Q L -1.4250
161 E L -1.5866
162 S L -0.7976
163 V L -0.5074
164 T L 0.0000
165 E L -2.1582
166 Q L -1.8181
167 D L -2.0694
168 S L -2.0050
169 K L -2.3509
170 D L -1.9478
171 S L -1.8126
172 T L 0.0000
173 Y L 0.0000
174 S L 0.0000
175 L L 0.0000
176 S L 0.0000
177 S L 0.0000
178 T L -0.7231
179 L L 0.0000
180 T L -0.5532
181 L L -0.8512
182 S L -1.0957
183 K L -2.1544
184 A L -1.9477
185 D L -2.6372
186 Y L 0.0000
187 E L -3.3608
188 K L -3.4666
189 H L -2.5256
190 K L -2.2653
191 V L -0.7218
192 Y L 0.0000
193 A L 0.0000
194 C L 0.0000
195 E L -0.6904
196 V L 0.0000
197 T L -1.0384
198 H L 0.0000
199 Q L -1.6528
200 G L -0.4648
201 L L -0.2499
202 S L -0.4675
203 S L -0.4150
204 P L -0.4404
205 V L 0.0330
206 T L -0.3836
207 K L -0.5529
208 S L -0.2881
209 F L -0.6530
210 N L -1.4764
211 R L -2.0011
212 G L -1.8882
213 E L -2.3733
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Laboratory of Theory of Biopolymers 2018