| Chain sequence(s) |
H: EVQLVQSGTEVKKPGESLKISCCKGSGYTVTSYWIIGWVRQMPGKGLEWMGFIYPGDSETRYSPTFQGQVVTISADKSFNTAFLQWSSLKASDTAMYYCCARVGSGWYPYTFDIWGQGTMVTVSSSASSTKGPSVFPLAPSSKSTSGGTAALGCCLVKDYFPEEPVTVSWNSGALTSSGVHTFPAVVLQSSGLYSSLSSSVVTVPSSSLGTQTTYICCNVNHKPSNNTKKVDKKKVEPK
L: EIVMTQSSPATLSVSPGERATLSCCRASESSISSSNLAWYQQKPGQAPRLFIYTTASTRAATTDDIPARFSGSSGSGTEFTLTISSSSLQSSEDFAVYYCQQYNNWPSITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACCEEVTHQGLSSSPVTKSFNRGE input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:54)
[INFO] Main: Simulation completed successfully. (00:03:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0139 | |
| 2 | V | H | -1.0372 | |
| 3 | Q | H | -1.0909 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.5983 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.4614 | |
| 8 | G | H | -0.5417 | |
| 9 | T | H | -0.2170 | |
| 10 | E | H | -0.3778 | |
| 11 | V | H | 0.0224 | |
| 12 | K | H | -1.1355 | |
| 13 | K | H | -1.8639 | |
| 14 | P | H | -1.9597 | |
| 15 | G | H | -1.8239 | |
| 16 | E | H | -1.8780 | |
| 17 | S | H | -1.6627 | |
| 18 | L | H | 0.0000 | |
| 19 | K | H | -1.9543 | |
| 20 | I | H | 0.0000 | |
| 21 | S | H | -0.4523 | |
| 22 | C | H | 0.0000 | |
| 23 | K | H | -0.5714 | |
| 24 | G | H | 0.0000 | |
| 25 | S | H | -0.7353 | |
| 26 | G | H | -1.1617 | |
| 27 | Y | H | -0.5063 | |
| 28 | T | H | -0.1570 | |
| 29 | V | H | 0.0000 | |
| 30 | T | H | -0.7883 | |
| 31 | S | H | -0.1434 | |
| 32 | Y | H | 0.2928 | |
| 33 | W | H | 0.2481 | |
| 34 | I | H | 0.0000 | |
| 35 | G | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | -0.6854 | |
| 39 | Q | H | -0.9015 | |
| 40 | M | H | -0.8667 | |
| 41 | P | H | -0.9566 | |
| 42 | G | H | -1.4184 | |
| 43 | K | H | -2.3501 | |
| 44 | G | H | -1.5546 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -1.0277 | |
| 47 | W | H | -0.2702 | |
| 48 | M | H | 0.0000 | |
| 49 | G | H | 0.0000 | |
| 50 | F | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | Y | H | -0.7216 | |
| 52A | P | H | 0.0000 | |
| 53 | G | H | -1.6429 | |
| 54 | D | H | -2.4371 | |
| 55 | S | H | -1.7784 | |
| 56 | E | H | -1.4716 | |
| 57 | T | H | -0.9375 | |
| 58 | R | H | -1.0767 | |
| 59 | Y | H | -0.9074 | |
| 60 | S | H | 0.0000 | |
| 61 | P | H | -1.1519 | |
| 62 | T | H | -0.8061 | |
| 63 | F | H | 0.0000 | |
| 64 | Q | H | -1.9450 | |
| 65 | G | H | -1.6439 | |
| 66 | Q | H | -1.9194 | |
| 67 | V | H | 0.0000 | |
| 68 | T | H | -0.9131 | |
| 69 | I | H | 0.0000 | |
| 70 | S | H | -0.8318 | |
| 71 | A | H | -1.0326 | |
| 72 | D | H | -1.3745 | |
| 73 | K | H | -2.0768 | |
| 74 | S | H | -0.4847 | |
| 75 | F | H | 0.5979 | |
| 76 | N | H | -0.8627 | |
| 77 | T | H | 0.0000 | |
| 78 | A | H | 0.0000 | |
| 79 | F | H | -0.5553 | |
| 80 | L | H | 0.0000 | |
| 81 | Q | H | -1.3536 | |
| 82 | W | H | 0.0000 | |
| 82A | S | H | -1.3225 | |
| 82B | S | H | -1.5944 | |
| 82C | L | H | 0.0000 | |
| 83 | K | H | -2.3978 | |
| 84 | A | H | -1.2836 | |
| 85 | S | H | -0.7717 | |
| 86 | D | H | -0.8403 | |
| 87 | T | H | -0.3989 | |
| 88 | A | H | 0.0000 | |
| 89 | M | H | -0.0409 | |
| 90 | Y | H | 0.0000 | |
| 91 | Y | H | 0.0000 | |
| 92 | C | H | 0.0000 | |
| 93 | A | H | 0.0000 | |
| 94 | R | H | 0.0000 | |
| 95 | V | H | 0.0000 | |
| 96 | G | H | 0.0000 | |
| 97 | S | H | 0.2632 | |
| 98 | G | H | 0.1820 | |
| 99 | W | H | 1.0301 | |
| 100 | Y | H | 0.5788 | |
| 100A | P | H | 0.5303 | |
| 100B | Y | H | 0.6851 | |
| 100C | T | H | 0.0000 | |
| 100D | F | H | 0.0000 | |
| 101 | D | H | -0.1385 | |
| 102 | I | H | -0.3842 | |
| 103 | W | H | 0.0000 | |
| 104 | G | H | 0.0000 | |
| 105 | Q | H | -1.2545 | |
| 106 | G | H | -0.6815 | |
| 107 | T | H | 0.0000 | |
| 108 | M | H | 0.0561 | |
| 109 | V | H | 0.0000 | |
| 110 | T | H | -0.4041 | |
| 111 | V | H | 0.0000 | |
| 112 | S | H | -0.8743 | |
| 113 | S | H | -0.9501 | |
| 114 | A | H | -0.5211 | |
| 115 | S | H | -0.6060 | |
| 116 | T | H | -0.6961 | |
| 117 | K | H | -1.1780 | |
| 118 | G | H | -1.4727 | |
| 119 | P | H | 0.0000 | |
| 120 | S | H | -0.3950 | |
| 121 | V | H | 0.0000 | |
| 122 | F | H | 0.0000 | |
| 123 | P | H | -1.0653 | |
| 124 | L | H | 0.0000 | |
| 125 | A | H | -1.1694 | |
| 126 | P | H | 0.0000 | |
| 127 | S | H | -1.2530 | |
| 128 | S | H | -1.4860 | |
| 129 | K | H | -1.9235 | |
| 130 | S | H | -1.1737 | |
| 131 | T | H | -0.9393 | |
| 132 | S | H | -0.8808 | |
| 133 | G | H | -0.7938 | |
| 134 | G | H | -0.6130 | |
| 135 | T | H | -0.4610 | |
| 136 | A | H | 0.0000 | |
| 137 | A | H | 0.0000 | |
| 138 | L | H | 0.0000 | |
| 139 | G | H | 0.0000 | |
| 140 | C | H | 0.0000 | |
| 141 | L | H | 0.0000 | |
| 142 | V | H | 0.0000 | |
| 143 | K | H | 0.0000 | |
| 144 | D | H | -0.4496 | |
| 145 | Y | H | 0.0000 | |
| 146 | F | H | 0.0000 | |
| 147 | P | H | 0.0000 | |
| 148 | E | H | -1.4404 | |
| 149 | P | H | -1.3322 | |
| 150 | V | H | -0.9389 | |
| 151 | T | H | -0.6595 | |
| 152 | V | H | -0.2004 | |
| 153 | S | H | -0.3661 | |
| 154 | W | H | 0.0000 | |
| 155 | N | H | -0.6984 | |
| 156 | S | H | -0.6393 | |
| 157 | G | H | -0.5670 | |
| 158 | A | H | -0.2396 | |
| 159 | L | H | 0.0229 | |
| 160 | T | H | -0.1673 | |
| 161 | S | H | -0.1832 | |
| 162 | G | H | -0.2299 | |
| 163 | V | H | 0.1439 | |
| 164 | H | H | -0.3183 | |
| 165 | T | H | 0.0103 | |
| 166 | F | H | 0.0000 | |
| 167 | P | H | -0.3290 | |
| 168 | A | H | 0.0184 | |
| 169 | V | H | 0.4844 | |
| 170 | L | H | 0.8843 | |
| 171 | Q | H | 0.1981 | |
| 172 | S | H | -0.0927 | |
| 173 | S | H | -0.2268 | |
| 174 | G | H | -0.0336 | |
| 175 | L | H | -0.1029 | |
| 176 | Y | H | 0.0000 | |
| 177 | S | H | 0.0000 | |
| 178 | L | H | 0.0000 | |
| 179 | S | H | 0.0000 | |
| 180 | S | H | 0.0000 | |
| 181 | V | H | 0.0000 | |
| 182 | V | H | 0.0000 | |
| 183 | T | H | -0.1270 | |
| 184 | V | H | 0.0000 | |
| 185 | P | H | -0.6009 | |
| 186 | S | H | -0.7549 | |
| 187 | S | H | -0.7126 | |
| 188 | S | H | -0.6470 | |
| 189 | L | H | -0.8225 | |
| 190 | G | H | -0.9714 | |
| 191 | T | H | -0.7221 | |
| 192 | Q | H | -1.2259 | |
| 193 | T | H | -1.1003 | |
| 194 | Y | H | 0.0000 | |
| 195 | I | H | -1.1322 | |
| 196 | C | H | 0.0000 | |
| 197 | N | H | -1.3716 | |
| 198 | V | H | 0.0000 | |
| 199 | N | H | -1.9264 | |
| 200 | H | H | 0.0000 | |
| 201 | K | H | -2.8926 | |
| 202 | P | H | -1.8492 | |
| 203 | S | H | -1.8684 | |
| 204 | N | H | -2.6406 | |
| 205 | T | H | -2.0455 | |
| 206 | K | H | -2.6336 | |
| 207 | V | H | -1.3274 | |
| 208 | D | H | -2.3929 | |
| 209 | K | H | -1.8390 | |
| 210 | K | H | -2.4283 | |
| 211 | V | H | 0.0000 | |
| 212 | E | H | -2.8026 | |
| 213 | P | H | -1.9409 | |
| 214 | K | H | -2.2671 | |
| 1 | E | L | -1.5230 | |
| 2 | I | L | -0.3431 | |
| 3 | V | L | 0.7535 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.5320 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.5851 | |
| 8 | P | L | -0.1998 | |
| 9 | A | L | -0.2556 | |
| 10 | T | L | -0.0587 | |
| 11 | L | L | 0.0002 | |
| 12 | S | L | -0.4841 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -1.7618 | |
| 15 | P | L | -1.7367 | |
| 16 | G | L | -2.0128 | |
| 17 | E | L | -2.9493 | |
| 18 | R | L | -2.9297 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.5207 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.7965 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.0487 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.1660 | |
| 27 | E | L | -2.2587 | |
| 28 | S | L | -1.6756 | |
| 29 | I | L | 0.0000 | |
| 30 | S | L | -1.0113 | |
| 31 | S | L | -0.7688 | |
| 32 | N | L | -0.6652 | |
| 33 | L | L | 0.0000 | |
| 34 | A | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | Q | L | 0.0000 | |
| 39 | K | L | -1.5456 | |
| 40 | P | L | -1.3365 | |
| 41 | G | L | -1.4532 | |
| 42 | Q | L | -2.1783 | |
| 43 | A | L | -1.5565 | |
| 44 | P | L | 0.0000 | |
| 45 | R | L | -1.9255 | |
| 46 | L | L | 0.0000 | |
| 47 | F | L | 0.0000 | |
| 48 | I | L | 0.0000 | |
| 49 | Y | L | -0.1484 | |
| 50 | T | L | -0.2892 | |
| 51 | A | L | 0.0000 | |
| 52 | S | L | -0.6848 | |
| 53 | T | L | -0.6521 | |
| 54 | R | L | -1.4022 | |
| 55 | A | L | -1.0967 | |
| 56 | T | L | -1.1983 | |
| 57 | D | L | -2.0060 | |
| 58 | I | L | 0.0000 | |
| 59 | P | L | -0.8207 | |
| 60 | A | L | -0.6190 | |
| 61 | R | L | -0.7963 | |
| 62 | F | L | 0.0000 | |
| 63 | S | L | -0.6394 | |
| 64 | G | L | -0.5442 | |
| 65 | S | L | -0.7584 | |
| 66 | G | L | -1.1920 | |
| 67 | S | L | -1.1792 | |
| 68 | G | L | -1.4158 | |
| 69 | T | L | -1.9684 | |
| 70 | E | L | -2.5635 | |
| 71 | F | L | 0.0000 | |
| 72 | T | L | -0.7986 | |
| 73 | L | L | 0.0000 | |
| 74 | T | L | -0.6574 | |
| 75 | I | L | 0.0000 | |
| 76 | S | L | -1.6950 | |
| 77 | S | L | -1.8894 | |
| 78 | L | L | 0.0000 | |
| 79 | Q | L | -1.6580 | |
| 80 | S | L | -1.4160 | |
| 81 | E | L | -2.1183 | |
| 82 | D | L | 0.0000 | |
| 83 | F | L | -0.5346 | |
| 84 | A | L | 0.0000 | |
| 85 | V | L | -0.0320 | |
| 86 | Y | L | 0.0000 | |
| 87 | Y | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | Q | L | 0.0000 | |
| 90 | Q | L | 0.0000 | |
| 91 | Y | L | 0.0000 | |
| 92 | N | L | -1.3391 | |
| 93 | N | L | -1.4442 | |
| 94 | W | L | -0.5508 | |
| 95 | P | L | -0.4493 | |
| 95A | S | L | -1.0452 | |
| 96 | I | L | 0.0000 | |
| 97 | T | L | -0.1296 | |
| 98 | F | L | 0.1097 | |
| 99 | G | L | 0.0000 | |
| 100 | Q | L | -1.3725 | |
| 101 | G | L | 0.0000 | |
| 102 | T | L | 0.0000 | |
| 103 | R | L | -0.2908 | |
| 104 | L | L | 0.0000 | |
| 105 | E | L | 0.0000 | |
| 106 | I | L | -0.8482 | |
| 107 | K | L | -1.3610 | |
| 108 | R | L | -1.1173 | |
| 109 | T | L | -0.1409 | |
| 110 | V | L | 0.3954 | |
| 111 | A | L | 0.0110 | |
| 112 | A | L | -0.1299 | |
| 113 | P | L | 0.0000 | |
| 114 | S | L | -0.1818 | |
| 115 | V | L | 0.0000 | |
| 116 | F | L | 0.1560 | |
| 117 | I | L | 0.1486 | |
| 118 | F | L | 0.0000 | |
| 119 | P | L | -0.3950 | |
| 120 | P | L | 0.0000 | |
| 121 | S | L | -1.7735 | |
| 122 | D | L | -2.9025 | |
| 123 | E | L | -2.9802 | |
| 124 | Q | L | 0.0000 | |
| 125 | L | L | -2.3054 | |
| 126 | K | L | -2.7891 | |
| 127 | S | L | -1.7379 | |
| 128 | G | L | -1.3926 | |
| 129 | T | L | -0.8858 | |
| 130 | A | L | 0.0000 | |
| 131 | S | L | 0.0000 | |
| 132 | V | L | 0.0000 | |
| 133 | V | L | 0.0000 | |
| 134 | C | L | 0.0000 | |
| 135 | L | L | 0.0000 | |
| 136 | L | L | 0.0000 | |
| 137 | N | L | 0.0000 | |
| 138 | N | L | -0.9882 | |
| 139 | F | L | 0.0000 | |
| 140 | Y | L | 0.0000 | |
| 141 | P | L | -1.3833 | |
| 142 | R | L | -2.2480 | |
| 143 | E | L | -2.7832 | |
| 144 | A | L | -1.9618 | |
| 145 | K | L | -1.9409 | |
| 146 | V | L | -0.7679 | |
| 147 | Q | L | -0.5286 | |
| 148 | W | L | 0.0000 | |
| 149 | K | L | -0.7868 | |
| 150 | V | L | 0.0000 | |
| 151 | D | L | -1.7632 | |
| 152 | N | L | -1.5771 | |
| 153 | A | L | -0.5428 | |
| 154 | L | L | 0.1393 | |
| 155 | Q | L | -0.6330 | |
| 156 | S | L | -0.8182 | |
| 157 | G | L | -1.3472 | |
| 158 | N | L | -1.7344 | |
| 159 | S | L | -1.4792 | |
| 160 | Q | L | -1.4250 | |
| 161 | E | L | -1.5866 | |
| 162 | S | L | -0.7976 | |
| 163 | V | L | -0.5074 | |
| 164 | T | L | 0.0000 | |
| 165 | E | L | -2.1582 | |
| 166 | Q | L | -1.8181 | |
| 167 | D | L | -2.0694 | |
| 168 | S | L | -2.0050 | |
| 169 | K | L | -2.3509 | |
| 170 | D | L | -1.9478 | |
| 171 | S | L | -1.8126 | |
| 172 | T | L | 0.0000 | |
| 173 | Y | L | 0.0000 | |
| 174 | S | L | 0.0000 | |
| 175 | L | L | 0.0000 | |
| 176 | S | L | 0.0000 | |
| 177 | S | L | 0.0000 | |
| 178 | T | L | -0.7231 | |
| 179 | L | L | 0.0000 | |
| 180 | T | L | -0.5532 | |
| 181 | L | L | -0.8512 | |
| 182 | S | L | -1.0957 | |
| 183 | K | L | -2.1544 | |
| 184 | A | L | -1.9477 | |
| 185 | D | L | -2.6372 | |
| 186 | Y | L | 0.0000 | |
| 187 | E | L | -3.3608 | |
| 188 | K | L | -3.4666 | |
| 189 | H | L | -2.5256 | |
| 190 | K | L | -2.2653 | |
| 191 | V | L | -0.7218 | |
| 192 | Y | L | 0.0000 | |
| 193 | A | L | 0.0000 | |
| 194 | C | L | 0.0000 | |
| 195 | E | L | -0.6904 | |
| 196 | V | L | 0.0000 | |
| 197 | T | L | -1.0384 | |
| 198 | H | L | 0.0000 | |
| 199 | Q | L | -1.6528 | |
| 200 | G | L | -0.4648 | |
| 201 | L | L | -0.2499 | |
| 202 | S | L | -0.4675 | |
| 203 | S | L | -0.4150 | |
| 204 | P | L | -0.4404 | |
| 205 | V | L | 0.0330 | |
| 206 | T | L | -0.3836 | |
| 207 | K | L | -0.5529 | |
| 208 | S | L | -0.2881 | |
| 209 | F | L | -0.6530 | |
| 210 | N | L | -1.4764 | |
| 211 | R | L | -2.0011 | |
| 212 | G | L | -1.8882 | |
| 213 | E | L | -2.3733 |