| Chain sequence(s) |
A: FQFGHGFQF
C: FQFGHGFQF B: FQFGHGFQF D: FQFGHGFQF input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 3.4265 | |
| 2 | Q | A | 2.1743 | |
| 3 | F | A | 2.6202 | |
| 4 | G | A | 0.4326 | |
| 5 | H | A | -0.5820 | |
| 6 | G | A | 0.1792 | |
| 7 | F | A | 1.5672 | |
| 8 | Q | A | 2.2678 | |
| 9 | F | A | 4.1323 | |
| 1 | F | B | 4.2626 | |
| 2 | Q | B | 2.8371 | |
| 3 | F | B | 2.6580 | |
| 4 | G | B | 0.5396 | |
| 5 | H | B | -0.5311 | |
| 6 | G | B | 0.4251 | |
| 7 | F | B | 2.1248 | |
| 8 | Q | B | 2.6040 | |
| 9 | F | B | 4.0162 | |
| 1 | F | C | 3.8210 | |
| 2 | Q | C | 2.3709 | |
| 3 | F | C | 2.5520 | |
| 4 | G | C | 0.2918 | |
| 5 | H | C | -0.6777 | |
| 6 | G | C | 0.1597 | |
| 7 | F | C | 1.6198 | |
| 8 | Q | C | 2.3344 | |
| 9 | F | C | 3.9508 | |
| 1 | F | D | 4.5373 | |
| 2 | Q | D | 2.8964 | |
| 3 | F | D | 2.8373 | |
| 4 | G | D | 0.3228 | |
| 5 | H | D | -0.5331 | |
| 6 | G | D | 0.2922 | |
| 7 | F | D | 2.2696 | |
| 8 | Q | D | 2.2398 | |
| 9 | F | D | 3.2407 |