| Chain sequence(s) |
H: VQLVESGGGLVQPGGSLRLSCAASGFNFSYYSIHWVRQAPGKGLEWVAYISSSSSYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYQYWQYHASWYWNGGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
L: MTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:07)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:07)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:07)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:07)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:07)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:31)
[INFO] Main: Simulation completed successfully. (00:06:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | V | H | 1.1112 | |
| 3 | Q | H | -0.0074 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.2584 | |
| 6 | E | H | -0.0418 | |
| 7 | S | H | -0.4293 | |
| 8 | G | H | -0.8783 | |
| 9 | G | H | 0.0332 | |
| 10 | G | H | 0.8729 | |
| 11 | L | H | 1.5136 | |
| 12 | V | H | 0.2578 | |
| 13 | Q | H | -1.1632 | |
| 14 | P | H | -1.3607 | |
| 15 | G | H | -1.4385 | |
| 16 | G | H | -1.1575 | |
| 17 | S | H | -1.2449 | |
| 18 | L | H | -1.1723 | |
| 19 | R | H | -2.2019 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.5299 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.3148 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.4092 | |
| 26 | G | H | -0.1643 | |
| 27 | F | H | 0.0406 | |
| 28 | N | H | -0.4143 | |
| 29 | F | H | 0.0000 | |
| 30 | S | H | 0.2217 | |
| 31 | Y | H | 1.3383 | |
| 32 | Y | H | 1.0113 | |
| 33 | S | H | 0.0000 | |
| 34 | I | H | 0.0000 | |
| 35 | H | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.7542 | |
| 40 | A | H | -1.2864 | |
| 41 | P | H | -0.8440 | |
| 42 | G | H | -1.4990 | |
| 43 | K | H | -2.4081 | |
| 44 | G | H | -1.6907 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -1.2911 | |
| 47 | W | H | 0.0000 | |
| 48 | V | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | Y | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | S | H | 0.0000 | |
| 52a | S | H | -0.0392 | |
| 53 | S | H | -0.3823 | |
| 54 | S | H | -0.4009 | |
| 55 | S | H | -0.2672 | |
| 56 | Y | H | -0.0308 | |
| 57 | T | H | -0.0624 | |
| 58 | S | H | -0.3045 | |
| 59 | Y | H | -0.8716 | |
| 60 | A | H | -1.3985 | |
| 61 | D | H | -2.4291 | |
| 62 | S | H | -1.6679 | |
| 63 | V | H | 0.0000 | |
| 64 | K | H | -2.7147 | |
| 65 | G | H | -1.9188 | |
| 66 | R | H | -1.6797 | |
| 67 | F | H | 0.0000 | |
| 68 | T | H | -1.0325 | |
| 69 | I | H | 0.0000 | |
| 70 | S | H | -0.3610 | |
| 71 | A | H | -0.5560 | |
| 72 | D | H | -1.0107 | |
| 73 | T | H | -1.0229 | |
| 74 | S | H | -1.2662 | |
| 75 | K | H | -2.0734 | |
| 76 | N | H | -1.5006 | |
| 77 | T | H | 0.0000 | |
| 78 | A | H | 0.0000 | |
| 79 | Y | H | -0.4839 | |
| 80 | L | H | 0.0000 | |
| 81 | Q | H | -1.5434 | |
| 82 | M | H | 0.0000 | |
| 82a | N | H | -1.9619 | |
| 82b | S | H | -1.4979 | |
| 82c | L | H | 0.0000 | |
| 83 | R | H | -2.7902 | |
| 84 | A | H | -1.9307 | |
| 85 | E | H | -2.3509 | |
| 86 | D | H | 0.0000 | |
| 87 | T | H | -0.3717 | |
| 88 | A | H | 0.0000 | |
| 89 | V | H | 0.5623 | |
| 90 | Y | H | 0.0000 | |
| 91 | Y | H | 0.0000 | |
| 92 | C | H | 0.0000 | |
| 93 | A | H | 0.0000 | |
| 94 | R | H | 0.1199 | |
| 95 | G | H | 0.0000 | |
| 96 | Y | H | 1.0363 | |
| 97 | Q | H | 0.8155 | |
| 98 | Y | H | 0.9108 | |
| 99 | W | H | 0.0000 | |
| 100 | Q | H | 0.1917 | |
| 100a | Y | H | 0.7704 | |
| 100b | H | H | 0.1510 | |
| 100c | A | H | 0.3937 | |
| 100d | S | H | 0.9490 | |
| 100e | W | H | 1.7936 | |
| 100f | Y | H | 1.8474 | |
| 100g | W | H | 1.0075 | |
| 100h | N | H | 0.0000 | |
| 100i | G | H | 0.1296 | |
| 100j | G | H | 0.0660 | |
| 100k | L | H | 0.0000 | |
| 101 | D | H | -0.1850 | |
| 102 | Y | H | 0.3536 | |
| 103 | W | H | 0.0000 | |
| 104 | G | H | 0.0000 | |
| 105 | Q | H | -1.2880 | |
| 106 | G | H | 0.0000 | |
| 107 | T | H | 0.4051 | |
| 108 | L | H | 1.4881 | |
| 109 | V | H | 0.0000 | |
| 110 | T | H | 0.3999 | |
| 111 | V | H | -0.4638 | |
| 112 | S | H | -0.2614 | |
| 113 | S | H | -0.3895 | |
| 114 | A | H | -0.5481 | |
| 115 | S | H | -0.5638 | |
| 116 | T | H | -0.9785 | |
| 117 | K | H | -1.5701 | |
| 118 | G | H | -1.6140 | |
| 119 | P | H | -0.8848 | |
| 120 | S | H | -0.4957 | |
| 121 | V | H | 0.0000 | |
| 122 | F | H | 0.0000 | |
| 123 | P | H | -1.0063 | |
| 124 | L | H | 0.0000 | |
| 125 | A | H | -1.1828 | |
| 126 | P | H | 0.0000 | |
| 127 | S | H | -1.3528 | |
| 128 | S | H | -1.5973 | |
| 129 | K | H | -1.9900 | |
| 130 | S | H | -1.2137 | |
| 131 | T | H | -0.9976 | |
| 132 | S | H | -1.3419 | |
| 133 | G | H | -1.1905 | |
| 134 | G | H | -0.8927 | |
| 135 | T | H | -0.5566 | |
| 136 | A | H | 0.0000 | |
| 137 | A | H | 0.0000 | |
| 138 | L | H | 0.0000 | |
| 139 | G | H | 0.0000 | |
| 140 | C | H | 0.0000 | |
| 141 | L | H | 0.0000 | |
| 142 | V | H | 0.0000 | |
| 143 | K | H | -0.6741 | |
| 144 | D | H | -1.1311 | |
| 145 | Y | H | 0.0000 | |
| 146 | F | H | 0.0000 | |
| 147 | P | H | -1.3164 | |
| 148 | E | H | -1.6602 | |
| 149 | P | H | -1.3716 | |
| 150 | V | H | -0.6902 | |
| 151 | T | H | -0.5894 | |
| 152 | V | H | -0.2670 | |
| 153 | S | H | -0.2768 | |
| 154 | W | H | 0.0000 | |
| 155 | N | H | -0.6419 | |
| 156 | S | H | -0.4972 | |
| 157 | G | H | -0.5550 | |
| 158 | A | H | -0.2221 | |
| 159 | L | H | -0.0253 | |
| 160 | T | H | -0.1145 | |
| 161 | S | H | -0.1996 | |
| 162 | G | H | -0.3573 | |
| 163 | V | H | 0.1945 | |
| 164 | H | H | -0.3342 | |
| 165 | T | H | 0.0013 | |
| 166 | F | H | 0.0000 | |
| 167 | P | H | -0.2404 | |
| 168 | A | H | 0.1544 | |
| 169 | V | H | 0.4684 | |
| 170 | L | H | 1.0721 | |
| 171 | Q | H | 0.0728 | |
| 172 | S | H | -0.0758 | |
| 173 | S | H | -0.3574 | |
| 174 | G | H | -0.1894 | |
| 175 | L | H | 0.0000 | |
| 176 | Y | H | -0.0942 | |
| 177 | S | H | -0.0752 | |
| 178 | L | H | 0.2691 | |
| 179 | S | H | 0.0092 | |
| 180 | S | H | 0.0000 | |
| 181 | V | H | 0.0000 | |
| 182 | V | H | 0.0000 | |
| 183 | T | H | -0.1377 | |
| 184 | V | H | 0.0000 | |
| 185 | P | H | -0.6263 | |
| 186 | S | H | -0.7348 | |
| 187 | S | H | -0.6857 | |
| 188 | S | H | -0.9798 | |
| 189 | L | H | -0.8413 | |
| 190 | G | H | -0.9810 | |
| 191 | T | H | -1.1603 | |
| 192 | Q | H | -1.5835 | |
| 193 | T | H | -1.5648 | |
| 194 | Y | H | 0.0000 | |
| 195 | I | H | -1.1067 | |
| 196 | C | H | 0.0000 | |
| 197 | N | H | -1.0576 | |
| 198 | V | H | 0.0000 | |
| 199 | N | H | -1.8915 | |
| 200 | H | H | 0.0000 | |
| 201 | K | H | -2.7453 | |
| 202 | P | H | -1.8766 | |
| 203 | S | H | -1.9378 | |
| 204 | N | H | -2.6554 | |
| 205 | T | H | -2.1056 | |
| 206 | K | H | -2.3207 | |
| 207 | V | H | -0.7883 | |
| 208 | D | H | -1.2381 | |
| 209 | K | H | -1.4426 | |
| 210 | K | H | -2.3372 | |
| 211 | V | H | 0.0000 | |
| 212 | E | H | -2.8243 | |
| 213 | P | H | -1.9348 | |
| 214 | K | H | -2.2300 | |
| 4 | M | L | -0.8216 | |
| 5 | T | L | -0.9378 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.8051 | |
| 8 | P | L | -0.5226 | |
| 9 | S | L | -0.9736 | |
| 10 | S | L | -0.9549 | |
| 11 | L | L | -0.5971 | |
| 12 | S | L | -0.8685 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.5910 | |
| 15 | V | L | 0.2302 | |
| 16 | G | L | -1.1216 | |
| 17 | D | L | -2.4990 | |
| 18 | R | L | -2.7021 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6277 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7948 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.9913 | |
| 25 | A | L | -1.3022 | |
| 26 | S | L | -1.2993 | |
| 27 | Q | L | -1.5051 | |
| 28 | S | L | -0.6922 | |
| 29 | V | L | -0.0578 | |
| 30 | S | L | -0.0224 | |
| 31 | S | L | 0.8042 | |
| 32 | A | L | 0.0000 | |
| 33 | V | L | 0.0000 | |
| 34 | A | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | Q | L | 0.0000 | |
| 39 | K | L | -1.6565 | |
| 40 | P | L | -1.2024 | |
| 41 | G | L | -1.6672 | |
| 42 | K | L | -2.5219 | |
| 43 | A | L | -1.5726 | |
| 44 | P | L | 0.0000 | |
| 45 | K | L | -1.3138 | |
| 46 | L | L | 0.0000 | |
| 47 | L | L | 0.0000 | |
| 48 | I | L | 0.0000 | |
| 49 | Y | L | 0.5452 | |
| 50 | S | L | 0.7440 | |
| 51 | A | L | 0.0000 | |
| 52 | S | L | -0.1596 | |
| 53 | S | L | 0.2664 | |
| 54 | L | L | 0.6499 | |
| 55 | Y | L | 0.4901 | |
| 56 | S | L | 0.0168 | |
| 57 | G | L | -0.2628 | |
| 58 | V | L | 0.1007 | |
| 59 | P | L | -0.1980 | |
| 60 | S | L | -0.2913 | |
| 61 | R | L | -0.7318 | |
| 62 | F | L | 0.0000 | |
| 63 | S | L | -0.2779 | |
| 64 | G | L | -0.4671 | |
| 65 | S | L | -1.1775 | |
| 66 | R | L | -2.0262 | |
| 67 | S | L | -1.3581 | |
| 68 | G | L | -1.1357 | |
| 69 | T | L | -1.3402 | |
| 70 | D | L | -1.5646 | |
| 71 | F | L | 0.0000 | |
| 72 | T | L | -0.8501 | |
| 73 | L | L | 0.0000 | |
| 74 | T | L | -0.5893 | |
| 75 | I | L | 0.0000 | |
| 76 | S | L | -1.4622 | |
| 77 | S | L | -1.4244 | |
| 78 | L | L | 0.0000 | |
| 79 | Q | L | -1.1342 | |
| 80 | P | L | -0.9191 | |
| 81 | E | L | -1.9013 | |
| 82 | D | L | 0.0000 | |
| 83 | F | L | -0.5907 | |
| 84 | A | L | 0.0000 | |
| 85 | T | L | 0.0000 | |
| 86 | Y | L | 0.0000 | |
| 87 | Y | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | Q | L | 0.0000 | |
| 90 | Q | L | 0.0000 | |
| 91 | S | L | 0.0000 | |
| 92 | S | L | -0.1727 | |
| 93 | S | L | -0.0448 | |
| 94 | S | L | 0.0572 | |
| 95 | L | L | 0.0497 | |
| 96 | I | L | 0.0000 | |
| 97 | T | L | -0.1224 | |
| 98 | F | L | -0.3411 | |
| 99 | G | L | 0.0000 | |
| 100 | Q | L | -1.7799 | |
| 101 | G | L | -1.3491 | |
| 102 | T | L | 0.0000 | |
| 103 | K | L | -1.9943 | |
| 104 | V | L | 0.0000 | |
| 105 | E | L | -0.8901 | |
| 106 | I | L | -0.2007 | |
| 107 | K | L | -1.1220 | |
| 108 | R | L | -0.9790 | |
| 109 | T | L | 0.1236 | |
| 110 | V | L | 0.8692 | |
| 111 | A | L | 0.2510 | |
| 112 | A | L | -0.0771 | |
| 113 | P | L | 0.0000 | |
| 114 | S | L | -0.2296 | |
| 115 | V | L | 0.0000 | |
| 116 | F | L | 0.0000 | |
| 117 | I | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | P | L | -0.7878 | |
| 120 | P | L | -0.7089 | |
| 121 | S | L | 0.0000 | |
| 122 | D | L | -2.1252 | |
| 123 | S | L | -1.4800 | |
| 124 | Q | L | 0.0000 | |
| 125 | L | L | -1.4381 | |
| 126 | K | L | -2.1607 | |
| 127 | S | L | -1.3386 | |
| 128 | G | L | -0.9126 | |
| 129 | T | L | -0.7236 | |
| 130 | A | L | 0.0000 | |
| 131 | S | L | 0.0000 | |
| 132 | V | L | 0.0000 | |
| 133 | V | L | 0.0000 | |
| 134 | C | L | 0.0000 | |
| 135 | L | L | 0.0000 | |
| 136 | L | L | 0.0000 | |
| 137 | N | L | 0.0000 | |
| 138 | N | L | -1.3822 | |
| 139 | F | L | 0.0000 | |
| 140 | Y | L | 0.0000 | |
| 141 | P | L | -1.8813 | |
| 142 | R | L | -3.1935 | |
| 143 | E | L | -3.2837 | |
| 144 | A | L | -2.3978 | |
| 145 | K | L | -2.4484 | |
| 146 | V | L | -1.0405 | |
| 147 | Q | L | -0.5939 | |
| 148 | W | L | 0.0000 | |
| 149 | K | L | -0.5376 | |
| 150 | V | L | 0.0000 | |
| 151 | D | L | -1.6440 | |
| 152 | N | L | -1.3454 | |
| 153 | A | L | -0.3019 | |
| 154 | L | L | 0.7332 | |
| 155 | Q | L | -0.2940 | |
| 156 | S | L | -0.6658 | |
| 157 | G | L | -1.1920 | |
| 158 | N | L | -1.3277 | |
| 159 | S | L | -1.4334 | |
| 160 | Q | L | -1.6700 | |
| 161 | E | L | -1.4958 | |
| 162 | S | L | -0.7749 | |
| 163 | V | L | -0.7635 | |
| 164 | T | L | -1.2797 | |
| 165 | E | L | -2.5672 | |
| 166 | Q | L | -2.7730 | |
| 167 | D | L | -2.6405 | |
| 168 | S | L | -2.2048 | |
| 169 | K | L | -2.9357 | |
| 170 | D | L | -3.1465 | |
| 171 | S | L | -2.5587 | |
| 172 | T | L | 0.0000 | |
| 173 | Y | L | 0.0000 | |
| 174 | S | L | 0.0000 | |
| 175 | L | L | 0.0000 | |
| 176 | S | L | -0.4188 | |
| 177 | S | L | 0.0000 | |
| 178 | T | L | -0.7412 | |
| 179 | L | L | 0.0000 | |
| 180 | T | L | -0.4690 | |
| 181 | L | L | -0.7985 | |
| 182 | S | L | -1.1030 | |
| 183 | K | L | -2.0261 | |
| 184 | A | L | -1.9772 | |
| 185 | D | L | -2.8391 | |
| 186 | Y | L | 0.0000 | |
| 187 | E | L | -3.8019 | |
| 188 | K | L | -3.7247 | |
| 189 | H | L | -3.1922 | |
| 190 | K | L | -3.3500 | |
| 191 | V | L | -2.0798 | |
| 192 | Y | L | 0.0000 | |
| 193 | A | L | -0.6942 | |
| 194 | C | L | 0.0000 | |
| 195 | E | L | -0.8067 | |
| 196 | V | L | 0.0000 | |
| 197 | T | L | -1.1114 | |
| 198 | H | L | 0.0000 | |
| 199 | Q | L | -1.5738 | |
| 200 | G | L | -0.4293 | |
| 201 | L | L | -0.3294 | |
| 202 | S | L | -0.4365 | |
| 203 | S | L | -0.3776 | |
| 204 | P | L | -0.4527 | |
| 205 | V | L | 0.1571 | |
| 206 | T | L | -0.3652 | |
| 207 | K | L | -0.5917 | |
| 208 | S | L | -0.8187 | |
| 209 | F | L | -1.1552 | |
| 210 | N | L | -2.4361 | |
| 211 | R | L | -3.3702 |