Project name: 6326-7

Status: done

Started: 2025-08-07 09:40:57
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Chain sequence(s) H: QVQLVESGGGLVQAGGSLRLSCAASGSIFGIAFMGWYRQAPGKEREVVAEIHSDGSTNYADSVQGRFTISRDNAKDTLYLEMNSLKPEDTAVYYCNAQTGLSADSGSWGPGTRVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:01)
Show buried residues

Minimal score value
-3.1527
Maximal score value
1.2825
Average score
-0.7321
Total score value
-86.3921

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5307
2 V H -1.1616
3 Q H -1.1206
4 L H 0.0000
5 V H 1.2825
6 E H 0.2166
7 S H -0.5574
8 G H -1.1639
9 G H -0.8625
11 G H -0.1445
12 L H 1.0282
13 V H 0.1152
14 Q H -1.2205
15 A H -1.3628
16 G H -1.2967
17 G H -0.8554
18 S H -1.0304
19 L H -0.5021
20 R H -1.3341
21 L H 0.0000
22 S H -0.2767
23 C H 0.0000
24 A H -0.4150
25 A H 0.0000
26 S H -1.0390
27 G H -1.0060
28 S H -0.3839
29 I H 0.0000
30 F H 1.1914
35 G H 0.3742
36 I H 0.0000
37 A H 0.0865
38 F H -0.0156
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 Y H 0.2439
43 R H 0.0000
44 Q H -1.6457
45 A H -1.7221
46 P H -1.1991
47 G H -1.8343
48 K H -3.0175
49 E H -3.1527
50 R H -2.0271
51 E H -1.1928
52 V H 0.1074
53 V H 0.0000
54 A H 0.0000
55 E H -0.3381
56 I H 0.0000
57 H H -1.0669
58 S H -1.1734
59 D H -2.0881
63 G H -1.4885
64 S H -1.1872
65 T H -0.9138
66 N H -1.2345
67 Y H -1.0067
68 A H -1.2498
69 D H -2.4343
70 S H -1.7089
71 V H 0.0000
72 Q H -2.2441
74 G H -1.5364
75 R H -1.5239
76 F H 0.0000
77 T H -0.8355
78 I H 0.0000
79 S H -0.7464
80 R H -1.7164
81 D H -2.7472
82 N H -2.4648
83 A H -1.8709
84 K H -3.0092
85 D H -2.4724
86 T H 0.0000
87 L H 0.0000
88 Y H -0.5665
89 L H 0.0000
90 E H -1.0691
91 M H 0.0000
92 N H -1.3687
93 S H -1.1908
94 L H 0.0000
95 K H -2.2195
96 P H -1.8247
97 E H -2.2878
98 D H 0.0000
99 T H -0.9310
100 A H 0.0000
101 V H -0.5355
102 Y H 0.0000
103 Y H 0.2021
104 C H 0.0000
105 N H 0.0000
106 A H 0.0000
107 Q H -0.3563
108 T H -0.2370
109 G H 0.0578
110 L H 0.9502
112 S H -0.1178
113 A H -0.6058
114 D H -1.7314
115 S H -1.0501
116 G H -0.7649
117 S H -0.6696
118 W H 0.1938
119 G H 0.0000
120 P H -0.0912
121 G H -0.1755
122 T H -0.8571
123 R H -1.6816
124 V H 0.0000
125 T H -0.3861
126 V H 0.0000
127 S H -0.7621
128 S H -0.8337
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Laboratory of Theory of Biopolymers 2018