| Chain sequence(s) |
A: QVQLQESGPGNVKPSETLSLTCTVSGGSVSSGDYYWTWIRQSPGKGLEWIGHIYYSGNTNYNPSLKSRLTISIDTSKTQFSLKLSSVTAADTAIYYCVRDRVTGAFDIWGQGTKVTVSSGGGGSGGGGSGGGGSGGGGSDIQMTQSASPEGASPGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDNATYFCQHFDHLPLAFGGGTKVEIK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:07)
[INFO] Main: Simulation completed successfully. (00:03:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.6327 | |
| 2 | V | A | -1.2886 | |
| 3 | Q | A | -1.9936 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.8667 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -1.0169 | |
| 8 | G | A | -1.1424 | |
| 9 | P | A | -1.2636 | |
| 10 | G | A | -1.6584 | |
| 11 | N | A | -2.3287 | |
| 12 | V | A | 0.0000 | |
| 13 | K | A | -2.6217 | |
| 14 | P | A | -1.6800 | |
| 15 | S | A | -1.2869 | |
| 16 | E | A | -1.7061 | |
| 17 | T | A | -1.4050 | |
| 18 | L | A | 0.0000 | |
| 19 | S | A | -1.1276 | |
| 20 | L | A | 0.0000 | |
| 21 | T | A | -0.7114 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -1.1636 | |
| 24 | V | A | 0.0000 | |
| 25 | S | A | -1.4731 | |
| 26 | G | A | -1.3455 | |
| 27 | G | A | -1.0509 | |
| 28 | S | A | -0.6803 | |
| 29 | V | A | 0.0000 | |
| 30 | S | A | -0.3639 | |
| 31 | S | A | -0.6526 | |
| 32 | G | A | -0.6672 | |
| 33 | D | A | -1.2556 | |
| 34 | Y | A | -0.0523 | |
| 35 | Y | A | 0.2972 | |
| 36 | W | A | 0.0000 | |
| 37 | T | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | I | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -0.9566 | |
| 42 | S | A | -1.0737 | |
| 43 | P | A | -0.9839 | |
| 44 | G | A | -1.4531 | |
| 45 | K | A | -2.2892 | |
| 46 | G | A | -1.4110 | |
| 47 | L | A | 0.0000 | |
| 48 | E | A | -0.8996 | |
| 49 | W | A | 0.0000 | |
| 50 | I | A | 0.0000 | |
| 51 | G | A | 0.0000 | |
| 52 | H | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | Y | A | -0.0157 | |
| 55 | Y | A | 0.0490 | |
| 56 | S | A | -0.3364 | |
| 57 | G | A | -0.7446 | |
| 58 | N | A | -1.3360 | |
| 59 | T | A | -0.7450 | |
| 60 | N | A | -0.7844 | |
| 61 | Y | A | -0.5981 | |
| 62 | N | A | -0.6937 | |
| 63 | P | A | -0.9652 | |
| 64 | S | A | -0.9060 | |
| 65 | L | A | 0.0000 | |
| 66 | K | A | -2.0627 | |
| 67 | S | A | -1.2994 | |
| 68 | R | A | -1.4442 | |
| 69 | L | A | 0.0000 | |
| 70 | T | A | -1.1303 | |
| 71 | I | A | 0.0000 | |
| 72 | S | A | -0.5655 | |
| 73 | I | A | -0.4588 | |
| 74 | D | A | -1.1008 | |
| 75 | T | A | -0.9507 | |
| 76 | S | A | -1.2757 | |
| 77 | K | A | -2.0832 | |
| 78 | T | A | -1.3539 | |
| 79 | Q | A | -1.2313 | |
| 80 | F | A | 0.0000 | |
| 81 | S | A | -0.6523 | |
| 82 | L | A | 0.0000 | |
| 83 | K | A | -1.8781 | |
| 84 | L | A | 0.0000 | |
| 85 | S | A | -1.1473 | |
| 86 | S | A | -1.1882 | |
| 87 | V | A | 0.0000 | |
| 88 | T | A | -0.6291 | |
| 89 | A | A | -0.2888 | |
| 90 | A | A | 0.0226 | |
| 91 | D | A | 0.0000 | |
| 92 | T | A | -0.4808 | |
| 93 | A | A | 0.0000 | |
| 94 | I | A | -0.5484 | |
| 95 | Y | A | 0.0000 | |
| 96 | Y | A | 0.0000 | |
| 97 | C | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | R | A | -0.1765 | |
| 100 | D | A | 0.0000 | |
| 101 | R | A | 0.0637 | |
| 102 | V | A | 1.1003 | |
| 103 | T | A | 0.4595 | |
| 104 | G | A | 0.3629 | |
| 105 | A | A | 0.0000 | |
| 106 | F | A | 0.0000 | |
| 107 | D | A | 0.0000 | |
| 108 | I | A | -0.4366 | |
| 109 | W | A | -0.9575 | |
| 110 | G | A | 0.0000 | |
| 111 | Q | A | -2.1761 | |
| 112 | G | A | -1.5031 | |
| 113 | T | A | -1.3783 | |
| 114 | K | A | -2.0694 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -1.2798 | |
| 117 | V | A | 0.0000 | |
| 118 | S | A | -1.4126 | |
| 119 | S | A | -1.4298 | |
| 120 | G | A | -1.5219 | |
| 121 | G | A | -1.1457 | |
| 122 | G | A | -1.1207 | |
| 123 | G | A | -1.1302 | |
| 124 | S | A | -0.9181 | |
| 125 | G | A | -1.0583 | |
| 126 | G | A | -1.1595 | |
| 127 | G | A | -1.1320 | |
| 128 | G | A | -1.1489 | |
| 129 | S | A | -0.9987 | |
| 130 | G | A | -1.1738 | |
| 131 | G | A | -1.1769 | |
| 132 | G | A | -1.1990 | |
| 133 | G | A | -1.1717 | |
| 134 | S | A | -1.0387 | |
| 135 | G | A | -1.1770 | |
| 136 | G | A | -1.3720 | |
| 137 | G | A | -1.2584 | |
| 138 | G | A | -1.3521 | |
| 139 | S | A | -1.3801 | |
| 140 | D | A | -1.7710 | |
| 141 | I | A | 0.0000 | |
| 142 | Q | A | -1.9643 | |
| 143 | M | A | 0.0000 | |
| 144 | T | A | -1.1073 | |
| 145 | Q | A | -0.6073 | |
| 146 | S | A | -0.5608 | |
| 147 | A | A | -0.6517 | |
| 148 | S | A | -1.4983 | |
| 149 | P | A | -1.6655 | |
| 150 | E | A | -2.7123 | |
| 151 | G | A | -2.2257 | |
| 152 | A | A | 0.0000 | |
| 153 | S | A | -1.9027 | |
| 154 | P | A | -1.6316 | |
| 155 | G | A | -1.6638 | |
| 156 | D | A | -2.1715 | |
| 157 | R | A | -2.4910 | |
| 158 | V | A | 0.0000 | |
| 159 | T | A | -0.6646 | |
| 160 | I | A | 0.0000 | |
| 161 | T | A | -0.7646 | |
| 162 | C | A | 0.0000 | |
| 163 | Q | A | -2.4379 | |
| 164 | A | A | 0.0000 | |
| 165 | S | A | -2.1473 | |
| 166 | Q | A | -2.8712 | |
| 167 | D | A | -2.9813 | |
| 168 | I | A | 0.0000 | |
| 169 | S | A | -1.3945 | |
| 170 | N | A | -1.0999 | |
| 171 | Y | A | -0.2492 | |
| 172 | L | A | 0.0000 | |
| 173 | N | A | 0.0000 | |
| 174 | W | A | 0.0000 | |
| 175 | Y | A | 0.0000 | |
| 176 | Q | A | 0.0000 | |
| 177 | Q | A | -1.5611 | |
| 178 | K | A | -1.9984 | |
| 179 | P | A | -1.3432 | |
| 180 | G | A | -1.7151 | |
| 181 | K | A | -2.6722 | |
| 182 | A | A | -1.7381 | |
| 183 | P | A | 0.0000 | |
| 184 | K | A | -1.7148 | |
| 185 | L | A | 0.0000 | |
| 186 | L | A | 0.0000 | |
| 187 | I | A | 0.0000 | |
| 188 | Y | A | -0.0425 | |
| 189 | D | A | -0.4405 | |
| 190 | A | A | 0.0000 | |
| 191 | S | A | -0.6487 | |
| 192 | N | A | -0.6523 | |
| 193 | L | A | -0.0236 | |
| 194 | E | A | -0.3420 | |
| 195 | T | A | -0.2871 | |
| 196 | G | A | -0.4229 | |
| 197 | V | A | -0.2916 | |
| 198 | P | A | -0.3033 | |
| 199 | S | A | -0.3829 | |
| 200 | R | A | -0.7125 | |
| 201 | F | A | 0.0000 | |
| 202 | S | A | -0.4197 | |
| 203 | G | A | -0.4216 | |
| 204 | S | A | -0.9617 | |
| 205 | G | A | -1.2350 | |
| 206 | S | A | -1.5085 | |
| 207 | G | A | -1.9487 | |
| 208 | T | A | -2.4746 | |
| 209 | D | A | -2.8587 | |
| 210 | F | A | 0.0000 | |
| 211 | T | A | -0.8149 | |
| 212 | F | A | 0.0000 | |
| 213 | T | A | -0.6097 | |
| 214 | I | A | 0.0000 | |
| 215 | S | A | -1.3199 | |
| 216 | S | A | -1.5602 | |
| 217 | L | A | 0.0000 | |
| 218 | Q | A | -1.6184 | |
| 219 | P | A | -1.7750 | |
| 220 | E | A | -1.8085 | |
| 221 | D | A | 0.0000 | |
| 222 | N | A | -2.1147 | |
| 223 | A | A | 0.0000 | |
| 224 | T | A | -1.2980 | |
| 225 | Y | A | 0.0000 | |
| 226 | F | A | 0.0000 | |
| 227 | C | A | 0.0000 | |
| 228 | Q | A | 0.0000 | |
| 229 | H | A | 0.0000 | |
| 230 | F | A | 0.0000 | |
| 231 | D | A | -1.0376 | |
| 232 | H | A | -0.6509 | |
| 233 | L | A | 0.0062 | |
| 234 | P | A | -0.1986 | |
| 235 | L | A | 0.0000 | |
| 236 | A | A | -0.5606 | |
| 237 | F | A | -0.3306 | |
| 238 | G | A | 0.0000 | |
| 239 | G | A | -1.2593 | |
| 240 | G | A | -1.0231 | |
| 241 | T | A | 0.0000 | |
| 242 | K | A | -2.3076 | |
| 243 | V | A | 0.0000 | |
| 244 | E | A | -3.0274 | |
| 245 | I | A | -2.3971 | |
| 246 | K | A | -2.4348 |