Project name: 1063

Status: done

Started: 2025-06-23 11:37:30
Settings
Chain sequence(s) H: DVQLQESGGGSVQAGGSLRLSCAASTYTYSRACMGWFRQAPGTEREGVAVIDRSGSTSYADSVKGRFTISKDSAKNTLYLQMNSLKPEDTAMYFCAAGPWEGPYCRRRSRDDFAYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:27)
Show buried residues

Minimal score value
-3.1071
Maximal score value
0.7136
Average score
-0.9955
Total score value
-125.4269

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D H -1.7906
2 V H -0.8666
3 Q H -1.6252
4 L H -1.2620
5 Q H -1.7714
6 E H -1.2839
7 S H -1.3440
8 G H -1.2214
9 G H -1.2040
11 G H -0.8860
12 S H -0.6955
13 V H -0.7907
14 Q H -1.6515
15 A H -1.7778
16 G H -1.4770
17 G H -1.1729
18 S H -1.4987
19 L H -1.3509
20 R H -2.3793
21 L H 0.0000
22 S H -0.9762
23 C H 0.0000
24 A H -1.0660
25 A H -0.6546
26 S H -0.7289
27 T H -0.0790
28 Y H 0.7136
29 T H 0.3647
30 Y H -0.5054
35 S H -1.1632
36 R H -2.2109
37 A H 0.0000
38 C H -0.7543
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.2161
45 A H -1.1868
46 P H -0.9026
47 G H -1.1219
48 T H -1.5392
49 E H -2.3865
50 R H -1.8417
51 E H -1.3681
52 G H -1.3515
53 V H 0.0000
54 A H 0.0000
55 V H -0.4555
56 I H 0.0000
57 D H 0.0000
58 R H -1.5898
59 S H -0.6587
63 G H -0.6520
64 S H -0.2719
65 T H -0.2385
66 S H -1.0949
67 Y H -1.5348
68 A H -1.7698
69 D H -2.5213
70 S H -1.9049
71 V H 0.0000
72 K H -2.6784
74 G H -1.8621
75 R H -1.7149
76 F H 0.0000
77 T H -1.0905
78 I H 0.0000
79 S H -0.5182
80 K H -1.0264
81 D H -1.3400
82 S H -1.2195
83 A H -0.9959
84 K H -1.8918
85 N H -1.0019
86 T H 0.0000
87 L H 0.0000
88 Y H -0.6994
89 L H 0.0000
90 Q H -1.8260
91 M H 0.0000
92 N H -2.1570
93 S H -1.5071
94 L H 0.0000
95 K H -2.4123
96 P H -1.8678
97 E H -2.3165
98 D H 0.0000
99 T H -1.1240
100 A H 0.0000
101 M H -0.5587
102 Y H 0.0000
103 F H -0.3980
104 C H 0.0000
105 A H 0.0000
106 A H 0.1681
107 G H 0.0000
108 P H -1.2045
109 W H -1.5018
110 E H -2.0504
111 G H -1.2835
111A P H -0.9320
111B Y H 0.1288
111C C H 0.0000
112D R H -2.3975
112C R H -3.1071
112B R H -2.6627
112A S H -2.4476
112 R H -2.5145
113 D H -2.9739
114 D H -3.0815
115 F H -1.3626
116 A H -0.3378
117 Y H 0.4479
118 W H 0.0159
119 G H -0.8874
120 Q H -1.6587
121 G H -1.0659
122 T H -1.1753
123 Q H -1.4753
124 V H 0.0000
125 T H -1.0119
126 V H 0.0000
127 S H -1.2399
128 S H -0.8933
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018