| Chain sequence(s) |
H: QVQLQQSGAELMKPGASVKLSCKATGYTFTGYWIEWVKQRPGHGLEWIGEILPGSGSTNYNEKFKGKATFTADTSSNTAYMQLSSLTTDESAIYYCARWILLRYVMDYWGQGTSVTVSS
L: DIQMNQSPSSLSASLGDTITITCHASQNINVWLSWYQQKPGHIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTITSLQPEDIATYYCQQGQSFPWTFGGGTNLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:05)
[INFO] Main: Simulation completed successfully. (00:02:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3896 | |
| 2 | V | H | -0.8556 | |
| 3 | Q | H | -1.3596 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.8704 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -1.1098 | |
| 8 | G | H | -0.7136 | |
| 9 | A | H | -0.1677 | |
| 11 | E | H | -0.1729 | |
| 12 | L | H | 0.8368 | |
| 13 | M | H | -0.3022 | |
| 14 | K | H | -1.6493 | |
| 15 | P | H | -1.1882 | |
| 16 | G | H | -1.1362 | |
| 17 | A | H | -0.8876 | |
| 18 | S | H | -1.1046 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -2.0960 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -1.0079 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.9626 | |
| 25 | A | H | 0.0000 | |
| 26 | T | H | -1.1042 | |
| 27 | G | H | -0.9236 | |
| 28 | Y | H | -0.3988 | |
| 29 | T | H | -0.1525 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.2728 | |
| 36 | G | H | 0.0539 | |
| 37 | Y | H | 0.5672 | |
| 38 | W | H | 0.5826 | |
| 39 | I | H | 0.0000 | |
| 40 | E | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | -0.5458 | |
| 44 | Q | H | -0.7866 | |
| 45 | R | H | -1.4328 | |
| 46 | P | H | -0.9688 | |
| 47 | G | H | -1.2844 | |
| 48 | H | H | -1.7229 | |
| 49 | G | H | -1.2482 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9474 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | E | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | L | H | -0.1535 | |
| 58 | P | H | 0.0000 | |
| 59 | G | H | -0.7922 | |
| 62 | S | H | -0.6870 | |
| 63 | G | H | -0.7996 | |
| 64 | S | H | -0.5284 | |
| 65 | T | H | -0.3213 | |
| 66 | N | H | -0.5422 | |
| 67 | Y | H | -1.0435 | |
| 68 | N | H | 0.0000 | |
| 69 | E | H | -3.3278 | |
| 70 | K | H | -3.2071 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.0907 | |
| 74 | G | H | -2.0327 | |
| 75 | K | H | -1.8136 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.9473 | |
| 78 | F | H | 0.0000 | |
| 79 | T | H | -0.3578 | |
| 80 | A | H | -0.7777 | |
| 81 | D | H | -1.3053 | |
| 82 | T | H | -0.9834 | |
| 83 | S | H | -0.6515 | |
| 84 | S | H | -0.8492 | |
| 85 | N | H | -1.0707 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.7232 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -1.5692 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.9681 | |
| 93 | S | H | -0.8647 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.1409 | |
| 96 | T | H | -1.2328 | |
| 97 | D | H | -1.8343 | |
| 98 | E | H | 0.0000 | |
| 99 | S | H | -0.6060 | |
| 100 | A | H | 0.0000 | |
| 101 | I | H | 0.1415 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | W | H | 0.0000 | |
| 108 | I | H | 1.6968 | |
| 109 | L | H | 2.6314 | |
| 110 | L | H | 2.4464 | |
| 112 | R | H | 1.3652 | |
| 113 | Y | H | 1.1992 | |
| 114 | V | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.2714 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2646 | |
| 121 | G | H | -0.6893 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.1368 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1124 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5529 | |
| 128 | S | H | -0.7346 | |
| 1 | D | L | -2.1797 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.3757 | |
| 4 | M | L | 0.0000 | |
| 5 | N | L | -2.1938 | |
| 6 | Q | L | -1.2791 | |
| 7 | S | L | -0.9025 | |
| 8 | P | L | -0.6063 | |
| 9 | S | L | -0.8007 | |
| 10 | S | L | -0.8248 | |
| 11 | L | L | -0.5985 | |
| 12 | S | L | -1.0549 | |
| 13 | A | L | -0.9318 | |
| 14 | S | L | -0.9405 | |
| 15 | L | L | -0.2262 | |
| 16 | G | L | -0.5189 | |
| 17 | D | L | -1.0541 | |
| 18 | T | L | -0.6074 | |
| 19 | I | L | 0.0000 | |
| 20 | T | L | -0.1596 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.6528 | |
| 23 | C | L | 0.0000 | |
| 24 | H | L | -2.0961 | |
| 25 | A | L | -2.0397 | |
| 26 | S | L | -2.0194 | |
| 27 | Q | L | -2.4327 | |
| 28 | N | L | -2.3253 | |
| 29 | I | L | 0.0000 | |
| 36 | N | L | -1.7953 | |
| 37 | V | L | -0.7032 | |
| 38 | W | L | -0.2241 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.3165 | |
| 46 | P | L | -0.8371 | |
| 47 | G | L | -1.1746 | |
| 48 | H | L | -1.5621 | |
| 49 | I | L | -0.6434 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.3180 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0001 | |
| 56 | K | L | -0.5153 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.6024 | |
| 66 | N | L | -0.7015 | |
| 67 | L | L | -0.0592 | |
| 68 | H | L | -0.3501 | |
| 69 | T | L | -0.2632 | |
| 70 | G | L | -0.4092 | |
| 71 | V | L | -0.2656 | |
| 72 | P | L | -0.2920 | |
| 74 | S | L | -0.3696 | |
| 75 | R | L | -0.5490 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3620 | |
| 78 | G | L | -0.4508 | |
| 79 | S | L | -0.6107 | |
| 80 | G | L | -0.7375 | |
| 83 | S | L | -1.0418 | |
| 84 | G | L | -1.4332 | |
| 85 | T | L | -1.4706 | |
| 86 | G | L | -1.2566 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.4481 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.2217 | |
| 91 | I | L | 0.0000 | |
| 92 | T | L | -0.6096 | |
| 93 | S | L | -0.6165 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.9102 | |
| 96 | P | L | -1.2695 | |
| 97 | E | L | -1.8435 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -0.6179 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.7330 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.0000 | |
| 108 | Q | L | -0.6325 | |
| 109 | S | L | 0.0343 | |
| 114 | F | L | 0.5819 | |
| 115 | P | L | -0.3514 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.6162 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.4586 | |
| 121 | G | L | -0.9589 | |
| 122 | T | L | 0.0000 | |
| 123 | N | L | -1.2428 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.7341 | |
| 126 | I | L | -1.4228 | |
| 127 | K | L | -1.8786 |