Project name: query_structure

Status: done

Started: 2026-03-16 23:46:19
Settings
Chain sequence(s) A: GTVPCGESCVFIPCITGIAGCSCKNKVCYID
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:16)
Show buried residues

Minimal score value
-2.0242
Maximal score value
2.8701
Average score
0.5127
Total score value
15.8946

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.3738
2 T A 0.3684
3 V A 1.4717
4 P A 0.5314
5 C A 0.5001
6 G A -0.1702
7 E A 0.0796
8 S A 0.4836
9 C A 1.1286
10 V A 2.1950
11 F A 2.8701
12 I A 2.1002
13 P A 1.3234
14 C A 1.5177
15 I A 2.2450
16 T A 1.5036
17 G A 1.4316
18 I A 2.2210
19 A A 1.1498
20 G A 0.1804
21 C A 0.0000
22 S A -0.2211
23 C A -0.2261
24 K A -1.4981
25 N A -2.0242
26 K A -1.2771
27 V A -0.6022
28 C A 0.0000
29 Y A -0.0122
30 I A 0.2371
31 D A -1.2387
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Laboratory of Theory of Biopolymers 2018