| Chain sequence(s) |
A: GTVPCGESCVFIPCITGIAGCSCKNKVCYID
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:16)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.3738 | |
| 2 | T | A | 0.3684 | |
| 3 | V | A | 1.4717 | |
| 4 | P | A | 0.5314 | |
| 5 | C | A | 0.5001 | |
| 6 | G | A | -0.1702 | |
| 7 | E | A | 0.0796 | |
| 8 | S | A | 0.4836 | |
| 9 | C | A | 1.1286 | |
| 10 | V | A | 2.1950 | |
| 11 | F | A | 2.8701 | |
| 12 | I | A | 2.1002 | |
| 13 | P | A | 1.3234 | |
| 14 | C | A | 1.5177 | |
| 15 | I | A | 2.2450 | |
| 16 | T | A | 1.5036 | |
| 17 | G | A | 1.4316 | |
| 18 | I | A | 2.2210 | |
| 19 | A | A | 1.1498 | |
| 20 | G | A | 0.1804 | |
| 21 | C | A | 0.0000 | |
| 22 | S | A | -0.2211 | |
| 23 | C | A | -0.2261 | |
| 24 | K | A | -1.4981 | |
| 25 | N | A | -2.0242 | |
| 26 | K | A | -1.2771 | |
| 27 | V | A | -0.6022 | |
| 28 | C | A | 0.0000 | |
| 29 | Y | A | -0.0122 | |
| 30 | I | A | 0.2371 | |
| 31 | D | A | -1.2387 |