Project name: 8OZ3

Status: done

Started: 2026-03-29 09:53:04
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Chain sequence(s) H: EVQLLESGGGLVQPGGSLRLSCAASGFNFGYSYMSWVRQAPGKGLEWVSSIGSTSSHTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARVYSSPGIDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQSIGSTLNWYQQKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYTWVPFTFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:06)
Show buried residues

Minimal score value
-2.7334
Maximal score value
1.6462
Average score
-0.4748
Total score value
-107.2949

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0319
2 V H -1.1241
3 Q H -0.9173
4 L H 0.0000
5 L H 0.9422
6 E H 0.0000
7 S H -0.1330
8 G H -0.4894
9 G H 0.3070
11 G H 0.8504
12 L H 1.4144
13 V H -0.0362
14 Q H -1.3319
15 P H -1.6000
16 G H -1.4262
17 G H -1.1556
18 S H -0.9274
19 L H -0.5397
20 R H -1.1861
21 L H 0.0000
22 S H -0.1643
23 C H 0.0000
24 A H -0.1661
25 A H 0.0000
26 S H -1.1490
27 G H -1.3714
28 F H -0.8914
29 N H -1.0646
30 F H 0.0000
35 G H -0.4362
36 Y H 1.1175
37 S H 0.9666
38 Y H 1.1991
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.5928
45 A H -1.0082
46 P H -0.8073
47 G H -1.4801
48 K H -2.3615
49 G H -1.6229
50 L H 0.0000
51 E H -1.0157
52 W H 0.0000
53 V H 0.0000
54 S H 0.0000
55 S H 0.0000
56 I H 0.0000
57 G H 0.0000
58 S H 0.1518
59 T H -0.2097
62 S H -0.7116
63 S H -0.7595
64 H H -0.9412
65 T H -0.3321
66 Y H 0.0562
67 Y H -0.5617
68 A H -1.3470
69 D H -2.5135
70 S H -1.7037
71 V H 0.0000
72 K H -2.3878
74 G H -1.6278
75 R H -1.3672
76 F H 0.0000
77 T H -0.6225
78 I H 0.0000
79 S H -0.3562
80 R H -1.0358
81 D H -1.6875
82 N H -2.0399
83 S H -1.7856
84 K H -2.5774
85 N H -2.2177
86 T H -1.1460
87 L H 0.0000
88 Y H -0.2785
89 L H 0.0000
90 Q H -0.7388
91 M H 0.0000
92 N H -1.2064
93 S H -1.2371
94 L H 0.0000
95 R H -2.1353
96 A H -1.6285
97 E H -2.1812
98 D H 0.0000
99 T H -0.3064
100 A H 0.0000
101 V H 0.8723
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 V H 0.0000
108 Y H 1.5971
109 S H 0.6470
110 S H 0.2042
113 P H 0.3630
114 G H 0.0000
115 I H 0.0000
116 D H 0.0000
117 Y H 0.4374
118 W H -0.1339
119 G H 0.0000
120 Q H -1.0987
121 G H -0.2161
122 T H 0.6246
123 L H 1.6425
124 V H 0.0000
125 T H 0.3963
126 V H 0.0000
127 S H -0.5299
128 S H -0.5632
1 D L -2.1121
2 I L 0.0000
3 Q L -2.2759
4 M L 0.0000
5 T L -1.4550
6 Q L 0.0000
7 S L -0.7225
8 P L -0.5715
9 S L -0.9555
10 S L -1.0990
11 L L -0.6131
12 S L -0.6849
13 A L 0.0000
14 S L 0.0189
15 V L 0.8868
16 G L -0.3448
17 D L -1.1937
18 R L -2.0602
19 V L 0.0000
20 T L -0.6037
21 I L 0.0000
22 T L -0.8338
23 C L 0.0000
24 R L -2.7334
25 A L 0.0000
26 S L -1.8508
27 Q L -1.8570
28 S L -1.0841
29 I L 0.0000
36 G L -0.5857
37 S L -0.4830
38 T L 0.0151
39 L L 0.0000
40 N L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.9827
44 Q L 0.0000
45 K L -1.8950
46 P L -1.3033
47 G L -1.6479
48 K L -2.6147
49 A L -1.5684
50 P L 0.0000
51 K L -1.3975
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.1480
56 G L -0.1560
57 A L 0.0000
65 S L -0.3132
66 S L 0.0152
67 L L 0.2342
68 Q L -0.2599
69 S L -0.3957
70 G L -0.5871
71 V L 0.0000
72 P L -0.4727
74 S L -0.4542
75 R L -0.7443
76 F L 0.0000
77 S L -0.3390
78 G L -0.2866
79 S L -0.7069
80 G L -1.1362
83 S L -1.1206
84 G L -1.1520
85 T L -1.6587
86 D L -2.1001
87 F L 0.0000
88 T L -0.7571
89 L L 0.0000
90 T L -0.6131
91 I L 0.0000
92 S L -1.1778
93 S L -0.9118
94 L L 0.0000
95 Q L -0.6398
96 P L -0.6324
97 E L -1.8366
98 D L 0.0000
99 F L -0.5745
100 A L 0.0000
101 T L -1.2357
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 Y L 1.1553
109 T L 0.9343
113 W L 1.6462
114 V L 1.0570
115 P L 0.3011
116 F L 0.5234
117 T L -0.4960
118 F L 0.0000
119 G L 0.0000
120 Q L -1.8155
121 G L 0.0000
122 T L 0.0000
123 K L -2.1532
124 L L 0.0000
125 E L -0.7942
126 I L 0.9900
127 K L -0.7442
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Laboratory of Theory of Biopolymers 2018