| Chain sequence(s) |
H: EVQLLESGGGLVQPGGSLRLSCAASGFNFGYSYMSWVRQAPGKGLEWVSSIGSTSSHTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARVYSSPGIDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQSIGSTLNWYQQKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYTWVPFTFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0319 | |
| 2 | V | H | -1.1241 | |
| 3 | Q | H | -0.9173 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.9422 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1330 | |
| 8 | G | H | -0.4894 | |
| 9 | G | H | 0.3070 | |
| 11 | G | H | 0.8504 | |
| 12 | L | H | 1.4144 | |
| 13 | V | H | -0.0362 | |
| 14 | Q | H | -1.3319 | |
| 15 | P | H | -1.6000 | |
| 16 | G | H | -1.4262 | |
| 17 | G | H | -1.1556 | |
| 18 | S | H | -0.9274 | |
| 19 | L | H | -0.5397 | |
| 20 | R | H | -1.1861 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1643 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.1661 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.1490 | |
| 27 | G | H | -1.3714 | |
| 28 | F | H | -0.8914 | |
| 29 | N | H | -1.0646 | |
| 30 | F | H | 0.0000 | |
| 35 | G | H | -0.4362 | |
| 36 | Y | H | 1.1175 | |
| 37 | S | H | 0.9666 | |
| 38 | Y | H | 1.1991 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5928 | |
| 45 | A | H | -1.0082 | |
| 46 | P | H | -0.8073 | |
| 47 | G | H | -1.4801 | |
| 48 | K | H | -2.3615 | |
| 49 | G | H | -1.6229 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0157 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | S | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | G | H | 0.0000 | |
| 58 | S | H | 0.1518 | |
| 59 | T | H | -0.2097 | |
| 62 | S | H | -0.7116 | |
| 63 | S | H | -0.7595 | |
| 64 | H | H | -0.9412 | |
| 65 | T | H | -0.3321 | |
| 66 | Y | H | 0.0562 | |
| 67 | Y | H | -0.5617 | |
| 68 | A | H | -1.3470 | |
| 69 | D | H | -2.5135 | |
| 70 | S | H | -1.7037 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.3878 | |
| 74 | G | H | -1.6278 | |
| 75 | R | H | -1.3672 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6225 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3562 | |
| 80 | R | H | -1.0358 | |
| 81 | D | H | -1.6875 | |
| 82 | N | H | -2.0399 | |
| 83 | S | H | -1.7856 | |
| 84 | K | H | -2.5774 | |
| 85 | N | H | -2.2177 | |
| 86 | T | H | -1.1460 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.2785 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.7388 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2064 | |
| 93 | S | H | -1.2371 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.1353 | |
| 96 | A | H | -1.6285 | |
| 97 | E | H | -2.1812 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3064 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.8723 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | V | H | 0.0000 | |
| 108 | Y | H | 1.5971 | |
| 109 | S | H | 0.6470 | |
| 110 | S | H | 0.2042 | |
| 113 | P | H | 0.3630 | |
| 114 | G | H | 0.0000 | |
| 115 | I | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.4374 | |
| 118 | W | H | -0.1339 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0987 | |
| 121 | G | H | -0.2161 | |
| 122 | T | H | 0.6246 | |
| 123 | L | H | 1.6425 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3963 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5299 | |
| 128 | S | H | -0.5632 | |
| 1 | D | L | -2.1121 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2759 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.4550 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7225 | |
| 8 | P | L | -0.5715 | |
| 9 | S | L | -0.9555 | |
| 10 | S | L | -1.0990 | |
| 11 | L | L | -0.6131 | |
| 12 | S | L | -0.6849 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | 0.0189 | |
| 15 | V | L | 0.8868 | |
| 16 | G | L | -0.3448 | |
| 17 | D | L | -1.1937 | |
| 18 | R | L | -2.0602 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6037 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8338 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.7334 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.8508 | |
| 27 | Q | L | -1.8570 | |
| 28 | S | L | -1.0841 | |
| 29 | I | L | 0.0000 | |
| 36 | G | L | -0.5857 | |
| 37 | S | L | -0.4830 | |
| 38 | T | L | 0.0151 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.9827 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.8950 | |
| 46 | P | L | -1.3033 | |
| 47 | G | L | -1.6479 | |
| 48 | K | L | -2.6147 | |
| 49 | A | L | -1.5684 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.3975 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1480 | |
| 56 | G | L | -0.1560 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.3132 | |
| 66 | S | L | 0.0152 | |
| 67 | L | L | 0.2342 | |
| 68 | Q | L | -0.2599 | |
| 69 | S | L | -0.3957 | |
| 70 | G | L | -0.5871 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -0.4727 | |
| 74 | S | L | -0.4542 | |
| 75 | R | L | -0.7443 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3390 | |
| 78 | G | L | -0.2866 | |
| 79 | S | L | -0.7069 | |
| 80 | G | L | -1.1362 | |
| 83 | S | L | -1.1206 | |
| 84 | G | L | -1.1520 | |
| 85 | T | L | -1.6587 | |
| 86 | D | L | -2.1001 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7571 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6131 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.1778 | |
| 93 | S | L | -0.9118 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.6398 | |
| 96 | P | L | -0.6324 | |
| 97 | E | L | -1.8366 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.5745 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.2357 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | Y | L | 1.1553 | |
| 109 | T | L | 0.9343 | |
| 113 | W | L | 1.6462 | |
| 114 | V | L | 1.0570 | |
| 115 | P | L | 0.3011 | |
| 116 | F | L | 0.5234 | |
| 117 | T | L | -0.4960 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.8155 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.1532 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.7942 | |
| 126 | I | L | 0.9900 | |
| 127 | K | L | -0.7442 |