| Chain sequence(s) |
A: MRFFRARDSTSTAVAVVVTALAASVSAQTSTSCNPLTNSNCPPDTALGMAIDVDFTKGSVNSFTATGGGSVSYGSDGVTFTVAKSGDAPQLSSIFYIMFGRIQFTMKSAPGAGIVSTLVMQSDDLDEIDMEWLGADNTEVQTNYFGKGQTTTYNRGQFNPAANNQAEFITYTIDWTADRIVWSVAGTVVRTLNYADAASGQYPQTPMQIKFGAWSGGDTATNAAGTVEWARGPTDYSKGPFSMVVKAIQVTDYSTGKEYIYSNTSGDWQSIEAVDGQVGVNVGVNVATQTATATAAAATSLSPTVPAGGIGGGAASTESGRPWVPSSTSTAINTIPSGWVMTPSGKIVPASSNMNRPPCLSLIALQLCGSVVIGILSFGVSPF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:31)
[INFO] Main: Simulation completed successfully. (00:03:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5537 | |
| 2 | R | A | -0.0034 | |
| 3 | F | A | 1.8205 | |
| 4 | F | A | 1.4429 | |
| 5 | R | A | -0.8530 | |
| 6 | A | A | -1.7409 | |
| 7 | R | A | -2.9645 | |
| 8 | D | A | -2.8337 | |
| 9 | S | A | -1.6161 | |
| 10 | T | A | -0.9725 | |
| 11 | S | A | -0.3220 | |
| 12 | T | A | 0.3032 | |
| 13 | A | A | 1.0602 | |
| 14 | V | A | 2.5140 | |
| 15 | A | A | 2.5544 | |
| 16 | V | A | 3.6777 | |
| 17 | V | A | 3.7367 | |
| 18 | V | A | 3.3555 | |
| 19 | T | A | 2.0699 | |
| 20 | A | A | 1.5672 | |
| 21 | L | A | 1.8156 | |
| 22 | A | A | 0.8612 | |
| 23 | A | A | 0.5869 | |
| 24 | S | A | 0.2174 | |
| 25 | V | A | 0.1212 | |
| 26 | S | A | -0.4103 | |
| 27 | A | A | -0.7645 | |
| 28 | Q | A | -1.5555 | |
| 29 | T | A | 0.0000 | |
| 30 | S | A | -1.0599 | |
| 31 | T | A | -0.6607 | |
| 32 | S | A | -0.5563 | |
| 33 | C | A | -0.5404 | |
| 34 | N | A | -0.6116 | |
| 35 | P | A | 0.0000 | |
| 36 | L | A | -0.3437 | |
| 37 | T | A | -0.5830 | |
| 38 | N | A | -1.2320 | |
| 39 | S | A | -1.3750 | |
| 40 | N | A | -1.7153 | |
| 41 | C | A | -0.8541 | |
| 42 | P | A | -0.5654 | |
| 43 | P | A | -0.6039 | |
| 44 | D | A | 0.0000 | |
| 45 | T | A | 0.0000 | |
| 46 | A | A | 0.0000 | |
| 47 | L | A | 0.0000 | |
| 48 | G | A | -0.7312 | |
| 49 | M | A | 0.0129 | |
| 50 | A | A | -0.4535 | |
| 51 | I | A | 0.0000 | |
| 52 | D | A | -1.8959 | |
| 53 | V | A | 0.0000 | |
| 54 | D | A | -1.8969 | |
| 55 | F | A | 0.0000 | |
| 56 | T | A | -1.9325 | |
| 57 | K | A | -2.2747 | |
| 58 | G | A | -1.2652 | |
| 59 | S | A | -0.9796 | |
| 60 | V | A | -1.1812 | |
| 61 | N | A | -1.0737 | |
| 62 | S | A | 0.0000 | |
| 63 | F | A | 0.0000 | |
| 64 | T | A | -0.1544 | |
| 65 | A | A | -0.2506 | |
| 66 | T | A | -0.4302 | |
| 67 | G | A | -1.0087 | |
| 68 | G | A | -1.2856 | |
| 69 | G | A | -1.2553 | |
| 70 | S | A | -0.4782 | |
| 71 | V | A | 0.1218 | |
| 72 | S | A | 0.0662 | |
| 73 | Y | A | -0.5037 | |
| 74 | G | A | -1.2850 | |
| 75 | S | A | -1.6155 | |
| 76 | D | A | -2.3649 | |
| 77 | G | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | T | A | -0.3196 | |
| 80 | F | A | 0.0000 | |
| 81 | T | A | -0.4948 | |
| 82 | V | A | 0.0000 | |
| 83 | A | A | -1.5685 | |
| 84 | K | A | -2.2272 | |
| 85 | S | A | -1.4334 | |
| 86 | G | A | -1.5476 | |
| 87 | D | A | -1.5491 | |
| 88 | A | A | 0.0000 | |
| 89 | P | A | 0.0000 | |
| 90 | Q | A | -0.4006 | |
| 91 | L | A | 0.0000 | |
| 92 | S | A | 0.0000 | |
| 93 | S | A | 0.0000 | |
| 94 | I | A | 0.0000 | |
| 95 | F | A | 0.0000 | |
| 96 | Y | A | -0.1686 | |
| 97 | I | A | 0.0000 | |
| 98 | M | A | 0.0000 | |
| 99 | F | A | 0.0000 | |
| 100 | G | A | 0.0000 | |
| 101 | R | A | 0.0000 | |
| 102 | I | A | 0.0000 | |
| 103 | Q | A | -0.6275 | |
| 104 | F | A | 0.0000 | |
| 105 | T | A | -0.4507 | |
| 106 | M | A | 0.0000 | |
| 107 | K | A | -1.1505 | |
| 108 | S | A | 0.0000 | |
| 109 | A | A | 0.0000 | |
| 110 | P | A | -0.7414 | |
| 111 | G | A | -0.9237 | |
| 112 | A | A | -0.7061 | |
| 113 | G | A | 0.0000 | |
| 114 | I | A | 0.0000 | |
| 115 | V | A | 0.0000 | |
| 116 | S | A | 0.0000 | |
| 117 | T | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | V | A | 0.0000 | |
| 120 | M | A | 0.0000 | |
| 121 | Q | A | 0.0000 | |
| 122 | S | A | 0.0000 | |
| 123 | D | A | -0.3428 | |
| 124 | D | A | 0.0000 | |
| 125 | L | A | 0.0000 | |
| 126 | D | A | 0.0000 | |
| 127 | E | A | 0.0000 | |
| 128 | I | A | 0.0000 | |
| 129 | D | A | 0.0000 | |
| 130 | M | A | 0.0000 | |
| 131 | E | A | 0.0000 | |
| 132 | W | A | 0.0000 | |
| 133 | L | A | 0.0000 | |
| 134 | G | A | -0.6668 | |
| 135 | A | A | -0.6670 | |
| 136 | D | A | -1.2095 | |
| 137 | N | A | -1.9209 | |
| 138 | T | A | -1.1179 | |
| 139 | E | A | -0.7988 | |
| 140 | V | A | 0.0000 | |
| 141 | Q | A | 0.0000 | |
| 142 | T | A | 0.0000 | |
| 143 | N | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | F | A | 0.0000 | |
| 146 | G | A | 0.0000 | |
| 147 | K | A | -0.7012 | |
| 148 | G | A | -0.8872 | |
| 149 | Q | A | -1.0690 | |
| 150 | T | A | -0.7033 | |
| 151 | T | A | -0.4406 | |
| 152 | T | A | -0.4673 | |
| 153 | Y | A | -0.3870 | |
| 154 | N | A | -1.0381 | |
| 155 | R | A | 0.0000 | |
| 156 | G | A | 0.0000 | |
| 157 | Q | A | -0.0549 | |
| 158 | F | A | 0.0000 | |
| 159 | N | A | 0.0000 | |
| 160 | P | A | -0.3761 | |
| 161 | A | A | 0.0000 | |
| 162 | A | A | -1.1159 | |
| 163 | N | A | -1.9475 | |
| 164 | N | A | 0.0000 | |
| 165 | Q | A | -1.4840 | |
| 166 | A | A | -1.2998 | |
| 167 | E | A | -1.7139 | |
| 168 | F | A | -0.6325 | |
| 169 | I | A | 0.0000 | |
| 170 | T | A | -0.2163 | |
| 171 | Y | A | 0.0000 | |
| 172 | T | A | -0.2530 | |
| 173 | I | A | 0.0000 | |
| 174 | D | A | -0.1906 | |
| 175 | W | A | 0.0000 | |
| 176 | T | A | 0.0000 | |
| 177 | A | A | -0.8790 | |
| 178 | D | A | -1.9803 | |
| 179 | R | A | -1.8984 | |
| 180 | I | A | 0.0000 | |
| 181 | V | A | -0.1937 | |
| 182 | W | A | 0.0000 | |
| 183 | S | A | 0.0000 | |
| 184 | V | A | 0.0000 | |
| 185 | A | A | 0.1384 | |
| 186 | G | A | -0.2578 | |
| 187 | T | A | -0.0440 | |
| 188 | V | A | 0.2073 | |
| 189 | V | A | 0.2157 | |
| 190 | R | A | -0.0886 | |
| 191 | T | A | -0.4648 | |
| 192 | L | A | 0.0000 | |
| 193 | N | A | -1.6593 | |
| 194 | Y | A | -0.5441 | |
| 195 | A | A | -0.8619 | |
| 196 | D | A | -1.7470 | |
| 197 | A | A | -0.7989 | |
| 198 | A | A | -0.3777 | |
| 199 | S | A | -0.4141 | |
| 200 | G | A | -0.5995 | |
| 201 | Q | A | 0.0000 | |
| 202 | Y | A | 0.0000 | |
| 203 | P | A | 0.0000 | |
| 204 | Q | A | 0.0000 | |
| 205 | T | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | M | A | 0.0000 | |
| 208 | Q | A | -0.1650 | |
| 209 | I | A | 0.0000 | |
| 210 | K | A | -0.3013 | |
| 211 | F | A | 0.0000 | |
| 212 | G | A | 0.0000 | |
| 213 | A | A | 0.0000 | |
| 214 | W | A | -0.5575 | |
| 215 | S | A | 0.0000 | |
| 216 | G | A | 0.0000 | |
| 217 | G | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | T | A | -0.3919 | |
| 220 | A | A | -0.2081 | |
| 221 | T | A | -0.4757 | |
| 222 | N | A | -0.3646 | |
| 223 | A | A | -0.3240 | |
| 224 | A | A | -0.5097 | |
| 225 | G | A | -0.7685 | |
| 226 | T | A | 0.0000 | |
| 227 | V | A | 0.0000 | |
| 228 | E | A | -2.1746 | |
| 229 | W | A | 0.0000 | |
| 230 | A | A | 0.0000 | |
| 231 | R | A | -1.5246 | |
| 232 | G | A | -1.2752 | |
| 233 | P | A | -0.9802 | |
| 234 | T | A | -1.1283 | |
| 235 | D | A | -1.6824 | |
| 236 | Y | A | -1.5781 | |
| 237 | S | A | -1.5494 | |
| 238 | K | A | -2.1265 | |
| 239 | G | A | -1.5956 | |
| 240 | P | A | -1.1388 | |
| 241 | F | A | 0.0000 | |
| 242 | S | A | -0.1783 | |
| 243 | M | A | 0.0000 | |
| 244 | V | A | -0.4134 | |
| 245 | V | A | 0.0000 | |
| 246 | K | A | -1.5892 | |
| 247 | A | A | -1.4102 | |
| 248 | I | A | 0.0000 | |
| 249 | Q | A | -1.3101 | |
| 250 | V | A | 0.0000 | |
| 251 | T | A | -0.1776 | |
| 252 | D | A | 0.0000 | |
| 253 | Y | A | 0.0000 | |
| 254 | S | A | 0.0000 | |
| 255 | T | A | -0.6966 | |
| 256 | G | A | -1.8737 | |
| 257 | K | A | -2.0004 | |
| 258 | E | A | -1.4389 | |
| 259 | Y | A | 0.0000 | |
| 260 | I | A | -0.3931 | |
| 261 | Y | A | 0.0000 | |
| 262 | S | A | -1.4130 | |
| 263 | N | A | -1.8123 | |
| 264 | T | A | -1.0278 | |
| 265 | S | A | -0.8585 | |
| 266 | G | A | 0.0000 | |
| 267 | D | A | -1.4465 | |
| 268 | W | A | -0.8975 | |
| 269 | Q | A | -1.7446 | |
| 270 | S | A | 0.0000 | |
| 271 | I | A | 0.0000 | |
| 272 | E | A | -2.0737 | |
| 273 | A | A | -1.6725 | |
| 274 | V | A | -1.4651 | |
| 275 | D | A | -2.4692 | |
| 276 | G | A | -1.7417 | |
| 277 | Q | A | -1.4300 | |
| 278 | V | A | -0.1687 | |
| 279 | G | A | 0.7984 | |
| 280 | V | A | 1.8029 | |
| 281 | N | A | 1.1860 | |
| 282 | V | A | 1.5615 | |
| 283 | G | A | 0.6285 | |
| 284 | V | A | 1.0339 | |
| 285 | N | A | -0.5075 | |
| 286 | V | A | -0.0713 | |
| 287 | A | A | -0.3395 | |
| 288 | T | A | -0.5701 | |
| 289 | Q | A | -0.9646 | |
| 290 | T | A | -0.5539 | |
| 291 | A | A | -0.3140 | |
| 292 | T | A | -0.2342 | |
| 293 | A | A | 0.0538 | |
| 294 | T | A | 0.0780 | |
| 295 | A | A | 0.1108 | |
| 296 | A | A | 0.1058 | |
| 297 | A | A | 0.0441 | |
| 298 | A | A | 0.1193 | |
| 299 | T | A | 0.0139 | |
| 300 | S | A | 0.2332 | |
| 301 | L | A | 0.5972 | |
| 302 | S | A | 0.0000 | |
| 303 | P | A | -0.3048 | |
| 304 | T | A | -0.3996 | |
| 305 | V | A | 0.0000 | |
| 306 | P | A | 0.0000 | |
| 307 | A | A | 0.0000 | |
| 308 | G | A | 0.0000 | |
| 309 | G | A | -0.5986 | |
| 310 | I | A | -0.4824 | |
| 311 | G | A | -1.0794 | |
| 312 | G | A | -1.2988 | |
| 313 | G | A | -1.0460 | |
| 314 | A | A | -0.5614 | |
| 315 | A | A | -0.7087 | |
| 316 | S | A | -1.2422 | |
| 317 | T | A | -1.4245 | |
| 318 | E | A | -2.5817 | |
| 319 | S | A | -1.7859 | |
| 320 | G | A | -1.9240 | |
| 321 | R | A | -2.0862 | |
| 322 | P | A | -0.4678 | |
| 323 | W | A | 1.3135 | |
| 324 | V | A | 1.8831 | |
| 325 | P | A | 0.7040 | |
| 326 | S | A | 0.0997 | |
| 327 | S | A | -0.2788 | |
| 328 | T | A | -0.3910 | |
| 329 | S | A | -0.0559 | |
| 330 | T | A | 0.1923 | |
| 331 | A | A | 0.5151 | |
| 332 | I | A | 1.3023 | |
| 333 | N | A | -0.2387 | |
| 334 | T | A | -0.0688 | |
| 335 | I | A | 0.3327 | |
| 336 | P | A | 0.3380 | |
| 337 | S | A | -0.1110 | |
| 338 | G | A | -0.1142 | |
| 339 | W | A | 0.4464 | |
| 340 | V | A | 0.4576 | |
| 341 | M | A | 0.0000 | |
| 342 | T | A | -0.6782 | |
| 343 | P | A | -0.8929 | |
| 344 | S | A | -1.3232 | |
| 345 | G | A | 0.0000 | |
| 346 | K | A | -1.6923 | |
| 347 | I | A | 0.0000 | |
| 348 | V | A | -0.2564 | |
| 349 | P | A | -0.0237 | |
| 350 | A | A | -0.0205 | |
| 351 | S | A | -0.3947 | |
| 352 | S | A | -0.7224 | |
| 353 | N | A | -1.1178 | |
| 354 | M | A | -0.8556 | |
| 355 | N | A | -2.1488 | |
| 356 | R | A | -2.3807 | |
| 357 | P | A | -1.0509 | |
| 358 | P | A | -0.2731 | |
| 359 | C | A | 1.1080 | |
| 360 | L | A | 2.4561 | |
| 361 | S | A | 2.0608 | |
| 362 | L | A | 3.2285 | |
| 363 | I | A | 3.2714 | |
| 364 | A | A | 2.1295 | |
| 365 | L | A | 2.1695 | |
| 366 | Q | A | 0.7038 | |
| 367 | L | A | 1.5045 | |
| 368 | C | A | 1.2829 | |
| 369 | G | A | 0.6034 | |
| 370 | S | A | 1.4515 | |
| 371 | V | A | 2.9812 | |
| 372 | V | A | 3.5971 | |
| 373 | I | A | 3.7628 | |
| 374 | G | A | 2.4985 | |
| 375 | I | A | 3.1757 | |
| 376 | L | A | 2.9090 | |
| 377 | S | A | 1.8287 | |
| 378 | F | A | 2.3574 | |
| 379 | G | A | 1.4139 | |
| 380 | V | A | 1.8357 | |
| 381 | S | A | 0.8211 | |
| 382 | P | A | 0.9732 | |
| 383 | F | A | 1.7665 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine