| Chain sequence(s) |
A: MRNSQERNNRLENLCWRIWNVARRKKQKIERMLTIEHTKFPTAKEFLEYATQFAPPSGFTIQFVTLMSPNTRIVLFSATASLRSYAPSLVRIASSVVSSCRRALGRKSSPFQCGEEELTSVRRRSRRCWGGRAHMRRSSTGAGSKSSPACAGRLASVGRKKSSPGVGRKKLADIGEEDPLARGERRTHRRRGGARRWCPDDSDGHRATGGQRRSASEGWSGTE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | GR58A,AT80A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 3.10845 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:02:19)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:29)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:09)
[INFO] Main: Simulation completed successfully. (00:04:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.1181 | |
| 2 | R | A | -2.2478 | |
| 3 | N | A | -2.9841 | |
| 4 | S | A | -2.8243 | |
| 5 | Q | A | -3.6748 | |
| 6 | E | A | -4.0741 | |
| 7 | R | A | -4.3188 | |
| 8 | N | A | -3.7823 | |
| 9 | N | A | -3.5458 | |
| 10 | R | A | -3.4793 | |
| 11 | L | A | -1.8664 | |
| 12 | E | A | -1.6414 | |
| 13 | N | A | -0.7969 | |
| 14 | L | A | 0.3498 | |
| 15 | C | A | 0.9751 | |
| 16 | W | A | 1.3742 | |
| 17 | R | A | 0.0568 | |
| 18 | I | A | 1.8036 | |
| 19 | W | A | 1.1379 | |
| 20 | N | A | -0.6544 | |
| 21 | V | A | -0.0312 | |
| 22 | A | A | -1.5122 | |
| 23 | R | A | -3.7256 | |
| 24 | R | A | -4.3989 | |
| 25 | K | A | -4.6362 | |
| 26 | K | A | -4.9971 | |
| 27 | Q | A | -4.8384 | |
| 28 | K | A | -4.5935 | |
| 29 | I | A | -2.6055 | |
| 30 | E | A | -2.7203 | |
| 31 | R | A | -2.7092 | |
| 32 | M | A | -0.8327 | |
| 33 | L | A | -0.1107 | |
| 34 | T | A | -0.2957 | |
| 35 | I | A | 0.7131 | |
| 36 | E | A | -1.4325 | |
| 37 | H | A | -1.5059 | |
| 38 | T | A | -1.3812 | |
| 39 | K | A | -1.9192 | |
| 40 | F | A | -0.5574 | |
| 41 | P | A | -0.8113 | |
| 42 | T | A | -0.7579 | |
| 43 | A | A | -0.7649 | |
| 44 | K | A | -2.0794 | |
| 45 | E | A | -1.8162 | |
| 46 | F | A | -0.7231 | |
| 47 | L | A | -0.5912 | |
| 48 | E | A | -1.9188 | |
| 49 | Y | A | -0.3554 | |
| 50 | A | A | 0.0796 | |
| 51 | T | A | -0.2865 | |
| 52 | Q | A | -0.4638 | |
| 53 | F | A | 1.2618 | |
| 54 | A | A | 0.6554 | |
| 55 | P | A | 0.1936 | |
| 56 | P | A | -0.3438 | |
| 57 | S | A | -0.9100 | |
| 58 | R | A | -1.5201 | mutated: GR58A |
| 59 | F | A | 0.3834 | |
| 60 | T | A | 0.2943 | |
| 61 | I | A | 0.8284 | |
| 62 | Q | A | 0.2880 | |
| 63 | F | A | 1.8072 | |
| 64 | V | A | 2.7984 | |
| 65 | T | A | 2.3563 | |
| 66 | L | A | 2.7435 | |
| 67 | M | A | 1.6424 | |
| 68 | S | A | 0.2089 | |
| 69 | P | A | -0.7216 | |
| 70 | N | A | -1.5437 | |
| 71 | T | A | -0.9910 | |
| 72 | R | A | -1.2246 | |
| 73 | I | A | 0.9126 | |
| 74 | V | A | 1.9755 | |
| 75 | L | A | 2.4539 | |
| 76 | F | A | 2.2627 | |
| 77 | S | A | 1.2661 | |
| 78 | A | A | 0.7574 | |
| 79 | T | A | 0.4123 | |
| 80 | T | A | 0.0020 | mutated: AT80A |
| 81 | S | A | -0.2240 | |
| 82 | L | A | 0.1144 | |
| 83 | R | A | -1.4918 | |
| 84 | S | A | -0.5949 | |
| 85 | Y | A | 1.0411 | |
| 86 | A | A | 0.4398 | |
| 87 | P | A | 0.2117 | |
| 88 | S | A | 0.4423 | |
| 89 | L | A | 1.4429 | |
| 90 | V | A | 1.2190 | |
| 91 | R | A | -0.0214 | |
| 92 | I | A | 2.1675 | |
| 93 | A | A | 1.7344 | |
| 94 | S | A | 1.0498 | |
| 95 | S | A | 1.2316 | |
| 96 | V | A | 2.0188 | |
| 97 | V | A | 1.4088 | |
| 98 | S | A | 0.0871 | |
| 99 | S | A | -0.1439 | |
| 100 | C | A | 0.0722 | |
| 101 | R | A | -1.8876 | |
| 102 | R | A | -2.3496 | |
| 103 | A | A | -1.1529 | |
| 104 | L | A | -0.5976 | |
| 105 | G | A | -2.2966 | |
| 106 | R | A | -3.1242 | |
| 107 | K | A | -2.5864 | |
| 108 | S | A | -1.2719 | |
| 109 | S | A | -0.8026 | |
| 110 | P | A | 0.1466 | |
| 111 | F | A | 1.2899 | |
| 112 | Q | A | -0.3247 | |
| 113 | C | A | -0.2874 | |
| 114 | G | A | -1.8386 | |
| 115 | E | A | -3.1699 | |
| 116 | E | A | -3.4061 | |
| 117 | E | A | -2.7663 | |
| 118 | L | A | -1.1811 | |
| 119 | T | A | -1.8989 | |
| 120 | S | A | -1.6812 | |
| 121 | V | A | -0.5899 | |
| 122 | R | A | -2.9386 | |
| 123 | R | A | -3.6047 | |
| 124 | R | A | -3.6383 | |
| 125 | S | A | -2.8367 | |
| 126 | R | A | -3.6239 | |
| 127 | R | A | -3.2245 | |
| 128 | C | A | -0.6192 | |
| 129 | W | A | 0.1448 | |
| 130 | G | A | -0.8624 | |
| 131 | G | A | -1.2817 | |
| 132 | R | A | -2.1490 | |
| 133 | A | A | -1.4028 | |
| 134 | H | A | -1.6512 | |
| 135 | M | A | -0.9629 | |
| 136 | R | A | -2.5510 | |
| 137 | R | A | -2.7878 | |
| 138 | S | A | -1.5347 | |
| 139 | S | A | -1.1682 | |
| 140 | T | A | -0.6339 | |
| 141 | G | A | -0.6266 | |
| 142 | A | A | -0.4519 | |
| 143 | G | A | -1.0233 | |
| 144 | S | A | -1.2804 | |
| 145 | K | A | -2.0658 | |
| 146 | S | A | -1.4136 | |
| 147 | S | A | -0.7980 | |
| 148 | P | A | -0.2048 | |
| 149 | A | A | 0.3033 | |
| 150 | C | A | 0.6335 | |
| 151 | A | A | -0.2397 | |
| 152 | G | A | -0.8500 | |
| 153 | R | A | -1.3023 | |
| 154 | L | A | 0.5552 | |
| 155 | A | A | 0.7053 | |
| 156 | S | A | 0.9155 | |
| 157 | V | A | 1.0100 | |
| 158 | G | A | -0.7471 | |
| 159 | R | A | -2.8996 | |
| 160 | K | A | -3.5694 | |
| 161 | K | A | -3.1027 | |
| 162 | S | A | -1.6580 | |
| 163 | S | A | -0.7373 | |
| 164 | P | A | -0.3416 | |
| 165 | G | A | 0.0484 | |
| 166 | V | A | 0.6923 | |
| 167 | G | A | -1.2373 | |
| 168 | R | A | -2.7851 | |
| 169 | K | A | -2.9748 | |
| 170 | K | A | -2.4304 | |
| 171 | L | A | -0.0220 | |
| 172 | A | A | -0.2917 | |
| 173 | D | A | -0.9255 | |
| 174 | I | A | 0.6976 | |
| 175 | G | A | -1.2554 | |
| 176 | E | A | -3.1219 | |
| 177 | E | A | -3.5675 | |
| 178 | D | A | -2.8142 | |
| 179 | P | A | -1.1988 | |
| 180 | L | A | 0.3639 | |
| 181 | A | A | -0.3574 | |
| 182 | R | A | -2.3624 | |
| 183 | G | A | -2.8273 | |
| 184 | E | A | -3.8924 | |
| 185 | R | A | -4.0427 | |
| 186 | R | A | -3.8627 | |
| 187 | T | A | -2.9458 | |
| 188 | H | A | -3.3557 | |
| 189 | R | A | -4.0056 | |
| 190 | R | A | -4.0829 | |
| 191 | R | A | -3.6826 | |
| 192 | G | A | -2.4998 | |
| 193 | G | A | -2.0833 | |
| 194 | A | A | -1.7550 | |
| 195 | R | A | -2.5158 | |
| 196 | R | A | -2.0151 | |
| 197 | W | A | -0.0253 | |
| 198 | C | A | -0.0519 | |
| 199 | P | A | -0.9303 | |
| 200 | D | A | -2.6925 | |
| 201 | D | A | -3.1566 | |
| 202 | S | A | -2.6473 | |
| 203 | D | A | -3.1277 | |
| 204 | G | A | -2.5138 | |
| 205 | H | A | -2.5352 | |
| 206 | R | A | -2.6239 | |
| 207 | A | A | -1.2312 | |
| 208 | T | A | -0.8760 | |
| 209 | G | A | -1.0082 | |
| 210 | G | A | -1.9511 | |
| 211 | Q | A | -2.8599 | |
| 212 | R | A | -3.5868 | |
| 213 | R | A | -3.2654 | |
| 214 | S | A | -1.5894 | |
| 215 | A | A | -0.9258 | |
| 216 | S | A | -1.3727 | |
| 217 | E | A | -1.9145 | |
| 218 | G | A | -1.0384 | |
| 219 | W | A | 0.3509 | |
| 220 | S | A | 0.0853 | |
| 221 | G | A | -0.7467 | |
| 222 | T | A | -1.2479 | |
| 223 | E | A | -1.9561 |