Project name: Q11_2

Status: done

Started: 2026-06-26 03:26:25
Settings
Chain sequence(s) A: QQKFQFQFEQQ
B: QQKFQFQFEQQ
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:36)
Show buried residues

Minimal score value
-3.2444
Maximal score value
1.9022
Average score
-1.1752
Total score value
-25.8542

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -2.5219
2 Q A -2.3816
3 K A -1.8083
4 F A 0.8953
5 Q A 0.2536
6 F A 1.8007
7 Q A -0.2749
8 F A -0.4326
9 E A -2.7577
10 Q A -3.2444
11 Q A -2.9439
1 Q B -2.7177
2 Q B -2.9455
3 K B -2.2832
4 F B 0.0950
5 Q B -0.1148
6 F B 1.9022
7 Q B 0.2565
8 F B 0.7547
9 E B -1.9189
10 Q B -2.7366
11 Q B -2.7302
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Laboratory of Theory of Biopolymers 2018