| Chain sequence(s) |
A: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
C: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY B: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY E: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY D: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY G: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY F: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY H: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:23)
[INFO] Main: Simulation completed successfully. (00:04:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -2.7250 | |
| 2 | C | A | -1.5574 | |
| 3 | N | A | -1.9242 | |
| 4 | T | A | -0.8161 | |
| 5 | A | A | -0.0641 | |
| 6 | T | A | 0.0000 | |
| 7 | C | A | 0.7103 | |
| 8 | A | A | 0.0000 | |
| 9 | T | A | -0.5529 | |
| 10 | Q | A | -1.4353 | |
| 11 | R | A | -2.3821 | |
| 12 | L | A | 0.0000 | |
| 13 | A | A | -1.2700 | |
| 14 | N | A | -0.6936 | |
| 15 | F | A | 0.8725 | |
| 16 | L | A | 1.2285 | |
| 17 | V | A | 0.0196 | |
| 18 | R | A | -2.1318 | |
| 19 | S | A | -2.0375 | |
| 20 | S | A | -1.8879 | |
| 21 | N | A | -1.9601 | |
| 22 | N | A | -0.8099 | |
| 23 | L | A | 1.4759 | |
| 24 | G | A | 1.3117 | |
| 25 | P | A | 1.3774 | |
| 26 | V | A | 2.1622 | |
| 27 | L | A | 0.8140 | |
| 28 | P | A | 0.0523 | |
| 29 | P | A | -0.6389 | |
| 30 | T | A | -0.8894 | |
| 31 | N | A | -1.4408 | |
| 32 | V | A | -0.4071 | |
| 33 | G | A | -0.9518 | |
| 34 | S | A | -0.9098 | |
| 35 | N | A | -1.0536 | |
| 36 | T | A | 0.1146 | |
| 37 | Y | A | 1.5905 | |
| 1 | K | B | -3.2950 | |
| 2 | C | B | -2.0427 | |
| 3 | N | B | -1.6551 | |
| 4 | T | B | 0.0000 | |
| 5 | A | B | -0.0241 | |
| 6 | T | B | 0.0000 | |
| 7 | C | B | 0.5129 | |
| 8 | A | B | 0.0000 | |
| 9 | T | B | -0.6403 | |
| 10 | Q | B | 0.0000 | |
| 11 | R | B | -2.5162 | |
| 12 | L | B | 0.0000 | |
| 13 | A | B | 0.0000 | |
| 14 | N | B | -1.1220 | |
| 15 | F | B | 0.0000 | |
| 16 | L | B | 0.0392 | |
| 17 | V | B | 0.0000 | |
| 18 | R | B | -2.9274 | |
| 19 | S | B | 0.0000 | |
| 20 | S | B | -2.2900 | |
| 21 | N | B | -2.2685 | |
| 22 | N | B | -1.1596 | |
| 23 | L | B | 0.6616 | |
| 24 | G | B | 0.0000 | |
| 25 | P | B | 0.0000 | |
| 26 | V | B | 1.5170 | |
| 27 | L | B | 0.0000 | |
| 28 | P | B | 0.1807 | |
| 29 | P | B | -0.6493 | |
| 30 | T | B | 0.0000 | |
| 31 | N | B | -1.4920 | |
| 32 | V | B | 0.0000 | |
| 33 | G | B | -1.0134 | |
| 34 | S | B | 0.0000 | |
| 35 | N | B | -0.4476 | |
| 36 | T | B | 0.0000 | |
| 37 | Y | B | 2.0405 | |
| 1 | K | C | -3.3468 | |
| 2 | C | C | -1.7708 | |
| 3 | N | C | -1.4629 | |
| 4 | T | C | 0.0000 | |
| 5 | A | C | 0.0131 | |
| 6 | T | C | 0.0000 | |
| 7 | C | C | 0.2686 | |
| 8 | A | C | 0.0000 | |
| 9 | T | C | 0.0000 | |
| 10 | Q | C | 0.0000 | |
| 11 | R | C | -2.2651 | |
| 12 | L | C | 0.0000 | |
| 13 | A | C | -1.8654 | |
| 14 | N | C | -1.5520 | |
| 15 | F | C | 0.0000 | |
| 16 | L | C | -0.4763 | |
| 17 | V | C | 0.0000 | |
| 18 | R | C | -2.7818 | |
| 19 | S | C | 0.0000 | |
| 20 | S | C | -2.0616 | |
| 21 | N | C | -2.0230 | |
| 22 | N | C | -1.1888 | |
| 23 | L | C | 0.4379 | |
| 24 | G | C | 0.0000 | |
| 25 | P | C | 0.0000 | |
| 26 | V | C | 0.9807 | |
| 27 | L | C | 0.0000 | |
| 28 | P | C | 0.0445 | |
| 29 | P | C | -0.4515 | |
| 30 | T | C | 0.0000 | |
| 31 | N | C | -1.1034 | |
| 32 | V | C | 0.0000 | |
| 33 | G | C | -0.8269 | |
| 34 | S | C | 0.0000 | |
| 35 | N | C | -0.1553 | |
| 36 | T | C | 0.0000 | |
| 37 | Y | C | 2.1677 | |
| 1 | K | D | -3.3580 | |
| 2 | C | D | -1.8093 | |
| 3 | N | D | -1.4344 | |
| 4 | T | D | 0.0000 | |
| 5 | A | D | -0.0103 | |
| 6 | T | D | 0.0000 | |
| 7 | C | D | 0.2524 | |
| 8 | A | D | 0.0000 | |
| 9 | T | D | -0.6028 | |
| 10 | Q | D | 0.0000 | |
| 11 | R | D | -2.4030 | |
| 12 | L | D | 0.0000 | |
| 13 | A | D | 0.0000 | |
| 14 | N | D | -1.5353 | |
| 15 | F | D | 0.0000 | |
| 16 | L | D | 0.1831 | |
| 17 | V | D | 0.0000 | |
| 18 | R | D | -2.8641 | |
| 19 | S | D | -2.5974 | |
| 20 | S | D | -2.0715 | |
| 21 | N | D | -2.0814 | |
| 22 | N | D | -1.2770 | |
| 23 | L | D | 0.2663 | |
| 24 | G | D | 0.0000 | |
| 25 | P | D | 0.0000 | |
| 26 | V | D | 0.9459 | |
| 27 | L | D | 0.0000 | |
| 28 | P | D | 0.0643 | |
| 29 | P | D | -0.4166 | |
| 30 | T | D | 0.0000 | |
| 31 | N | D | -0.9941 | |
| 32 | V | D | 0.0000 | |
| 33 | G | D | -0.7941 | |
| 34 | S | D | 0.0000 | |
| 35 | N | D | -0.1076 | |
| 36 | T | D | 0.0000 | |
| 37 | Y | D | 2.1473 | |
| 1 | K | E | -3.3543 | |
| 2 | C | E | -1.8138 | |
| 3 | N | E | -1.3691 | |
| 4 | T | E | 0.0000 | |
| 5 | A | E | -0.0095 | |
| 6 | T | E | 0.0000 | |
| 7 | C | E | 0.2227 | |
| 8 | A | E | 0.0000 | |
| 9 | T | E | 0.0000 | |
| 10 | Q | E | 0.0000 | |
| 11 | R | E | -2.0653 | |
| 12 | L | E | 0.0000 | |
| 13 | A | E | -1.7824 | |
| 14 | N | E | -1.4440 | |
| 15 | F | E | 0.0000 | |
| 16 | L | E | -0.3939 | |
| 17 | V | E | 0.0000 | |
| 18 | R | E | -3.0550 | |
| 19 | S | E | -2.7377 | |
| 20 | S | E | -2.2276 | |
| 21 | N | E | -2.2609 | |
| 22 | N | E | 0.0000 | |
| 23 | L | E | 0.4220 | |
| 24 | G | E | 0.0000 | |
| 25 | P | E | 0.0000 | |
| 26 | V | E | 0.8664 | |
| 27 | L | E | 0.0000 | |
| 28 | P | E | 0.0432 | |
| 29 | P | E | -0.4208 | |
| 30 | T | E | 0.0000 | |
| 31 | N | E | -1.0256 | |
| 32 | V | E | 0.0000 | |
| 33 | G | E | -0.7968 | |
| 34 | S | E | 0.0000 | |
| 35 | N | E | -0.1522 | |
| 36 | T | E | 0.0000 | |
| 37 | Y | E | 2.0185 | |
| 1 | K | F | -3.3393 | |
| 2 | C | F | -1.7478 | |
| 3 | N | F | -1.4641 | |
| 4 | T | F | -0.3365 | |
| 5 | A | F | -0.0087 | |
| 6 | T | F | 0.0000 | |
| 7 | C | F | 0.2698 | |
| 8 | A | F | 0.0000 | |
| 9 | T | F | -0.5968 | |
| 10 | Q | F | 0.0000 | |
| 11 | R | F | -2.2826 | |
| 12 | L | F | 0.0000 | |
| 13 | A | F | 0.0000 | |
| 14 | N | F | -1.6422 | |
| 15 | F | F | 0.0000 | |
| 16 | L | F | -0.7106 | |
| 17 | V | F | 0.0000 | |
| 18 | R | F | -3.0855 | |
| 19 | S | F | -2.6515 | |
| 20 | S | F | -2.1102 | |
| 21 | N | F | -1.9371 | |
| 22 | N | F | 0.0000 | |
| 23 | L | F | 0.6845 | |
| 24 | G | F | 0.0000 | |
| 25 | P | F | 0.0000 | |
| 26 | V | F | 0.9118 | |
| 27 | L | F | 0.0000 | |
| 28 | P | F | 0.0486 | |
| 29 | P | F | -0.4347 | |
| 30 | T | F | 0.0000 | |
| 31 | N | F | -1.0495 | |
| 32 | V | F | 0.0000 | |
| 33 | G | F | -0.8269 | |
| 34 | S | F | 0.0000 | |
| 35 | N | F | -0.1073 | |
| 36 | T | F | 0.0000 | |
| 37 | Y | F | 2.0040 | |
| 1 | K | G | -3.0734 | |
| 2 | C | G | -1.7689 | |
| 3 | N | G | -1.4391 | |
| 4 | T | G | 0.0000 | |
| 5 | A | G | -0.0875 | |
| 6 | T | G | 0.0000 | |
| 7 | C | G | 0.4252 | |
| 8 | A | G | 0.0000 | |
| 9 | T | G | 0.0000 | |
| 10 | Q | G | 0.0000 | |
| 11 | R | G | -2.5729 | |
| 12 | L | G | 0.0000 | |
| 13 | A | G | -1.5030 | |
| 14 | N | G | -0.9692 | |
| 15 | F | G | 0.0000 | |
| 16 | L | G | 0.2597 | |
| 17 | V | G | 0.0000 | |
| 18 | R | G | -2.6046 | |
| 19 | S | G | -2.6198 | |
| 20 | S | G | -2.2071 | |
| 21 | N | G | -1.9657 | |
| 22 | N | G | 0.0000 | |
| 23 | L | G | 0.4156 | |
| 24 | G | G | 0.0000 | |
| 25 | P | G | 0.0000 | |
| 26 | V | G | 1.2016 | |
| 27 | L | G | 0.0000 | |
| 28 | P | G | 0.1596 | |
| 29 | P | G | -0.5638 | |
| 30 | T | G | 0.0000 | |
| 31 | N | G | -1.3089 | |
| 32 | V | G | 0.0000 | |
| 33 | G | G | -0.9518 | |
| 34 | S | G | 0.0000 | |
| 35 | N | G | -0.3903 | |
| 36 | T | G | 0.0000 | |
| 37 | Y | G | 1.9152 | |
| 1 | K | H | -2.3538 | |
| 2 | C | H | -0.9113 | |
| 3 | N | H | -1.3089 | |
| 4 | T | H | -0.4893 | |
| 5 | A | H | -0.1124 | |
| 6 | T | H | 0.2399 | |
| 7 | C | H | 0.3967 | |
| 8 | A | H | -0.0777 | |
| 9 | T | H | -1.0393 | |
| 10 | Q | H | -2.0641 | |
| 11 | R | H | -2.2780 | |
| 12 | L | H | -0.5561 | |
| 13 | A | H | -0.7299 | |
| 14 | N | H | -0.4449 | |
| 15 | F | H | 1.0975 | |
| 16 | L | H | 1.3228 | |
| 17 | V | H | -0.2692 | |
| 18 | R | H | -2.2504 | |
| 19 | S | H | -2.1862 | |
| 20 | S | H | -1.8883 | |
| 21 | N | H | -2.1867 | |
| 22 | N | H | -1.7731 | |
| 23 | L | H | 0.2730 | |
| 24 | G | H | 0.4247 | |
| 25 | P | H | 1.0092 | |
| 26 | V | H | 1.4497 | |
| 27 | L | H | 0.4876 | |
| 28 | P | H | 0.1439 | |
| 29 | P | H | -0.5996 | |
| 30 | T | H | -0.9557 | |
| 31 | N | H | -1.4234 | |
| 32 | V | H | -0.4972 | |
| 33 | G | H | -0.8259 | |
| 34 | S | H | -0.8204 | |
| 35 | N | H | -0.8267 | |
| 36 | T | H | 0.3250 | |
| 37 | Y | H | 1.5291 |