| Chain sequence(s) |
A: MGSSHHHHHHYYLEVDNKFNKEFSMAMKEILALPNLNQYQKEAFKTSLKDDPSQSANLLAEAKKLNDAQAPKVD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:38)
[INFO] Main: Simulation completed successfully. (00:01:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7466 | |
| 2 | G | A | -0.0820 | |
| 3 | S | A | -0.5306 | |
| 4 | S | A | -1.1312 | |
| 5 | H | A | -2.0237 | |
| 6 | H | A | -2.4400 | |
| 7 | H | A | -2.6501 | |
| 8 | H | A | -2.4959 | |
| 9 | H | A | -1.8223 | |
| 10 | H | A | -0.5743 | |
| 11 | Y | A | 1.2354 | |
| 12 | Y | A | 2.0576 | |
| 13 | L | A | 1.6004 | |
| 14 | E | A | -0.4738 | |
| 15 | V | A | -0.1183 | |
| 16 | D | A | -2.5949 | |
| 17 | N | A | -3.2193 | |
| 18 | K | A | -3.1545 | |
| 19 | F | A | -2.2518 | |
| 20 | N | A | -3.1449 | |
| 21 | K | A | -3.2188 | |
| 22 | E | A | -2.2436 | |
| 23 | F | A | -1.8681 | |
| 24 | S | A | -1.5100 | |
| 25 | M | A | -0.7964 | |
| 26 | A | A | 0.0000 | |
| 27 | M | A | 0.0000 | |
| 28 | K | A | -1.4493 | |
| 29 | E | A | -1.0744 | |
| 30 | I | A | 0.0000 | |
| 31 | L | A | -0.4027 | |
| 32 | A | A | -0.2349 | |
| 33 | L | A | -0.5329 | |
| 34 | P | A | -0.4650 | |
| 35 | N | A | -1.0448 | |
| 36 | L | A | 0.0000 | |
| 37 | N | A | -1.0643 | |
| 38 | Q | A | -1.3278 | |
| 39 | Y | A | -0.3138 | |
| 40 | Q | A | -0.7411 | |
| 41 | K | A | -1.2521 | |
| 42 | E | A | -2.0421 | |
| 43 | A | A | -1.2409 | |
| 44 | F | A | -1.1478 | |
| 45 | K | A | -1.9064 | |
| 46 | T | A | -2.1005 | |
| 47 | S | A | -2.0147 | |
| 48 | L | A | 0.0000 | |
| 49 | K | A | -3.0940 | |
| 50 | D | A | -3.1909 | |
| 51 | D | A | -2.2995 | |
| 52 | P | A | -2.1756 | |
| 53 | S | A | -1.3710 | |
| 54 | Q | A | -1.8295 | |
| 55 | S | A | 0.0000 | |
| 56 | A | A | -0.8202 | |
| 57 | N | A | -1.4995 | |
| 58 | L | A | -1.3214 | |
| 59 | L | A | -1.0403 | |
| 60 | A | A | -1.5054 | |
| 61 | E | A | -2.2762 | |
| 62 | A | A | 0.0000 | |
| 63 | K | A | -2.4670 | |
| 64 | K | A | -2.9181 | |
| 65 | L | A | -1.6085 | |
| 66 | N | A | 0.0000 | |
| 67 | D | A | -3.0109 | |
| 68 | A | A | -1.7839 | |
| 69 | Q | A | -1.8171 | |
| 70 | A | A | -1.4348 | |
| 71 | P | A | -1.2448 | |
| 72 | K | A | -1.7823 | |
| 73 | V | A | 0.0006 | |
| 74 | D | A | -1.5062 |