| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGRTFSVDAMGWLRQAPGKEREFVVVIDWTGGSTAYADSVKGRFTISRDNARNTVYLQMNNLKPEDTGVYYCAARERSRTAYDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:58)
[INFO] Main: Simulation completed successfully. (00:01:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.0748 | |
| 2 | V | A | -1.1583 | |
| 3 | Q | A | -0.9297 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.8849 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.2217 | |
| 8 | G | A | -0.9596 | |
| 9 | G | A | 0.0048 | |
| 10 | G | A | 0.5848 | |
| 11 | L | A | 1.3583 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.5661 | |
| 14 | P | A | -1.9972 | |
| 15 | G | A | -1.8166 | |
| 16 | G | A | -1.2896 | |
| 17 | S | A | -1.6437 | |
| 18 | L | A | -1.3446 | |
| 19 | R | A | -2.3509 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5320 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1585 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.0727 | |
| 26 | G | A | -1.4296 | |
| 27 | R | A | -1.1389 | |
| 28 | T | A | -0.4045 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.4499 | |
| 31 | V | A | 0.2846 | |
| 32 | D | A | 0.0000 | |
| 33 | A | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | L | A | 0.0783 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.6544 | |
| 40 | A | A | 0.0000 | |
| 41 | P | A | -1.3710 | |
| 42 | G | A | -1.9410 | |
| 43 | K | A | -3.3432 | |
| 44 | E | A | -3.5606 | |
| 45 | R | A | -2.5184 | |
| 46 | E | A | -1.8391 | |
| 47 | F | A | 0.0965 | |
| 48 | V | A | 0.0000 | |
| 49 | V | A | 0.0000 | |
| 50 | V | A | 0.3372 | |
| 51 | I | A | 0.0000 | |
| 52 | D | A | -0.3966 | |
| 53 | W | A | 0.0341 | |
| 54 | T | A | -0.1782 | |
| 55 | G | A | -0.5226 | |
| 56 | G | A | -0.6812 | |
| 57 | S | A | -0.4764 | |
| 58 | T | A | -0.1648 | |
| 59 | A | A | -0.1875 | |
| 60 | Y | A | -0.6034 | |
| 61 | A | A | -1.0914 | |
| 62 | D | A | -2.4139 | |
| 63 | S | A | -1.7215 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.6332 | |
| 66 | G | A | -1.8774 | |
| 67 | R | A | -1.8947 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.9466 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.5606 | |
| 72 | R | A | -0.9262 | |
| 73 | D | A | -1.3700 | |
| 74 | N | A | -1.2978 | |
| 75 | A | A | -1.3242 | |
| 76 | R | A | -2.3364 | |
| 77 | N | A | -1.6116 | |
| 78 | T | A | -0.9672 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.6353 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.6435 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.9075 | |
| 85 | N | A | -2.2516 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.6386 | |
| 88 | P | A | -1.9900 | |
| 89 | E | A | -2.3781 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.4873 | |
| 92 | G | A | 0.0000 | |
| 93 | V | A | 0.7381 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | 0.3041 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | R | A | -1.6665 | |
| 100 | E | A | -1.9910 | |
| 101 | R | A | -2.3783 | |
| 102 | S | A | -1.9915 | |
| 103 | R | A | -2.7395 | |
| 104 | T | A | -1.4920 | |
| 105 | A | A | -0.9872 | |
| 106 | Y | A | 0.0000 | |
| 107 | D | A | -0.8031 | |
| 108 | Y | A | -0.1329 | |
| 109 | W | A | 0.2537 | |
| 110 | G | A | 0.0000 | |
| 111 | Q | A | -0.6206 | |
| 112 | G | A | 0.0000 | |
| 113 | T | A | 0.6362 | |
| 114 | L | A | 1.6339 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | 0.2985 | |
| 117 | V | A | 0.0000 | |
| 118 | S | A | -0.8830 | |
| 119 | S | A | -0.6328 |