| Chain sequence(s) |
A: MAVPASPQHPRGYGILLLTLLLKALATTASACNHLRPQDATFSHDSLQLLRDMAPTLPQLCPQHNASCSFNDTILDTSNTRQADKTTHDILQHLFKILSSPSTPAHWNDSQRQSLLNRIHRYTQHLEQCLDSSDTRSRTRWPRNLHLTIKKHFSCLHTFLQDNDYSACAWEHVRLQARAWFLHIHNLTGNTRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:46)
[INFO] Main: Simulation completed successfully. (00:02:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.4918 | |
| 2 | A | A | 1.3651 | |
| 3 | V | A | 1.9270 | |
| 4 | P | A | 0.6781 | |
| 5 | A | A | 0.0654 | |
| 6 | S | A | -0.5828 | |
| 7 | P | A | -1.2794 | |
| 8 | Q | A | -2.2001 | |
| 9 | H | A | -2.1997 | |
| 10 | P | A | -1.7052 | |
| 11 | R | A | -1.8563 | |
| 12 | G | A | -0.1084 | |
| 13 | Y | A | 1.4760 | |
| 14 | G | A | 1.2901 | |
| 15 | I | A | 2.9584 | |
| 16 | L | A | 3.5663 | |
| 17 | L | A | 3.5545 | |
| 18 | L | A | 3.9370 | |
| 19 | T | A | 3.0750 | |
| 20 | L | A | 3.1162 | |
| 21 | L | A | 3.6214 | |
| 22 | L | A | 2.9117 | |
| 23 | K | A | 0.6229 | |
| 24 | A | A | 1.3674 | |
| 25 | L | A | 2.0912 | |
| 26 | A | A | 0.9189 | |
| 27 | T | A | 0.3249 | |
| 28 | T | A | -0.3184 | |
| 29 | A | A | -0.0314 | |
| 30 | S | A | -0.5088 | |
| 31 | A | A | -1.0858 | |
| 32 | C | A | -1.2542 | |
| 33 | N | A | -1.9339 | |
| 34 | H | A | -1.9985 | |
| 35 | L | A | 0.0000 | |
| 36 | R | A | -1.6661 | |
| 37 | P | A | -1.2675 | |
| 38 | Q | A | -1.3456 | |
| 39 | D | A | 0.0000 | |
| 40 | A | A | -0.8914 | |
| 41 | T | A | -0.8278 | |
| 42 | F | A | 0.0000 | |
| 43 | S | A | 0.0000 | |
| 44 | H | A | -1.1537 | |
| 45 | D | A | -1.1464 | |
| 46 | S | A | 0.0000 | |
| 47 | L | A | -1.2501 | |
| 48 | Q | A | -1.6250 | |
| 49 | L | A | -1.4116 | |
| 50 | L | A | 0.0000 | |
| 51 | R | A | -2.4081 | |
| 52 | D | A | -1.6715 | |
| 53 | M | A | 0.0000 | |
| 54 | A | A | 0.0000 | |
| 55 | P | A | -0.8116 | |
| 56 | T | A | -0.3452 | |
| 57 | L | A | 0.7120 | |
| 58 | P | A | 0.2863 | |
| 59 | Q | A | -0.1785 | |
| 60 | L | A | 0.9818 | |
| 61 | C | A | 0.2947 | |
| 62 | P | A | -0.6065 | |
| 63 | Q | A | -1.5775 | |
| 64 | H | A | -1.5136 | |
| 65 | N | A | -1.7956 | |
| 66 | A | A | -0.8166 | |
| 67 | S | A | -0.5933 | |
| 68 | C | A | -0.4402 | |
| 69 | S | A | -0.5978 | |
| 70 | F | A | -0.8190 | |
| 71 | N | A | -1.4828 | |
| 72 | D | A | -1.6849 | |
| 73 | T | A | -1.0523 | |
| 74 | I | A | -0.5151 | |
| 75 | L | A | 0.0000 | |
| 76 | D | A | -2.2090 | |
| 77 | T | A | -1.4492 | |
| 78 | S | A | -1.4890 | |
| 79 | N | A | -1.2818 | |
| 80 | T | A | -1.1667 | |
| 81 | R | A | -1.0422 | |
| 82 | Q | A | 0.0000 | |
| 83 | A | A | 0.0000 | |
| 84 | D | A | -0.7236 | |
| 85 | K | A | -0.6806 | |
| 86 | T | A | 0.0000 | |
| 87 | T | A | 0.0000 | |
| 88 | H | A | -0.8640 | |
| 89 | D | A | 0.0000 | |
| 90 | I | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | Q | A | -1.1814 | |
| 93 | H | A | 0.0000 | |
| 94 | L | A | 0.0000 | |
| 95 | F | A | -0.9806 | |
| 96 | K | A | -1.7281 | |
| 97 | I | A | 0.0000 | |
| 98 | L | A | 0.0000 | |
| 99 | S | A | -0.8335 | |
| 100 | S | A | -0.5853 | |
| 101 | P | A | -0.3656 | |
| 102 | S | A | -0.3801 | |
| 103 | T | A | -0.2957 | |
| 104 | P | A | -0.3234 | |
| 105 | A | A | -0.4398 | |
| 106 | H | A | -0.6417 | |
| 107 | W | A | 0.0000 | |
| 108 | N | A | -1.8838 | |
| 109 | D | A | -2.1278 | |
| 110 | S | A | -1.6134 | |
| 111 | Q | A | -1.8904 | |
| 112 | R | A | -1.9982 | |
| 113 | Q | A | -2.0909 | |
| 114 | S | A | -1.4682 | |
| 115 | L | A | 0.0000 | |
| 116 | L | A | -1.4880 | |
| 117 | N | A | -1.9926 | |
| 118 | R | A | -2.0173 | |
| 119 | I | A | 0.0000 | |
| 120 | H | A | -2.5005 | |
| 121 | R | A | -3.1743 | |
| 122 | Y | A | 0.0000 | |
| 123 | T | A | -2.3678 | |
| 124 | Q | A | -3.0185 | |
| 125 | H | A | -2.6564 | |
| 126 | L | A | 0.0000 | |
| 127 | E | A | -2.4829 | |
| 128 | Q | A | -2.6217 | |
| 129 | C | A | -1.8654 | |
| 130 | L | A | -1.9463 | |
| 131 | D | A | -2.6105 | |
| 132 | S | A | -1.7014 | |
| 133 | S | A | -1.8933 | |
| 134 | D | A | -2.8572 | |
| 135 | T | A | -2.5561 | |
| 136 | R | A | -3.0525 | |
| 137 | S | A | -2.7004 | |
| 138 | R | A | -3.3437 | |
| 139 | T | A | -2.2639 | |
| 140 | R | A | -2.7387 | |
| 141 | W | A | -1.9218 | |
| 142 | P | A | -1.6735 | |
| 143 | R | A | -2.5314 | |
| 144 | N | A | -1.8464 | |
| 145 | L | A | 0.0000 | |
| 146 | H | A | -1.1427 | |
| 147 | L | A | -0.7842 | |
| 148 | T | A | -1.1790 | |
| 149 | I | A | 0.0000 | |
| 150 | K | A | -1.8470 | |
| 151 | K | A | -1.9904 | |
| 152 | H | A | 0.0000 | |
| 153 | F | A | 0.0000 | |
| 154 | S | A | -1.1236 | |
| 155 | C | A | -0.8083 | |
| 156 | L | A | 0.0000 | |
| 157 | H | A | -1.1303 | |
| 158 | T | A | -1.3375 | |
| 159 | F | A | 0.0000 | |
| 160 | L | A | 0.0000 | |
| 161 | Q | A | -2.7630 | |
| 162 | D | A | -3.0484 | |
| 163 | N | A | -2.2644 | |
| 164 | D | A | -2.6786 | |
| 165 | Y | A | -1.2584 | |
| 166 | S | A | -0.8766 | |
| 167 | A | A | -0.0798 | |
| 168 | C | A | -0.0653 | |
| 169 | A | A | 0.0000 | |
| 170 | W | A | 0.0000 | |
| 171 | E | A | 0.0000 | |
| 172 | H | A | -0.2878 | |
| 173 | V | A | 0.0000 | |
| 174 | R | A | -0.5574 | |
| 175 | L | A | -0.1411 | |
| 176 | Q | A | -0.3209 | |
| 177 | A | A | 0.0000 | |
| 178 | R | A | -1.5722 | |
| 179 | A | A | -0.5763 | |
| 180 | W | A | 0.0000 | |
| 181 | F | A | 0.0000 | |
| 182 | L | A | -0.4581 | |
| 183 | H | A | -1.0784 | |
| 184 | I | A | 0.0000 | |
| 185 | H | A | -1.1533 | |
| 186 | N | A | -1.9540 | |
| 187 | L | A | 0.0000 | |
| 188 | T | A | 0.0000 | |
| 189 | G | A | -1.8486 | |
| 190 | N | A | -2.5493 | |
| 191 | T | A | -2.1818 | |
| 192 | R | A | -2.3487 | |
| 193 | T | A | -1.2596 |