| Chain sequence(s) |
A: MGSHHHHHHMKKDDQIAAAIALRGMAKDGKFAVKGGGGSEAAAKGGGGSQNKNDQIAAAIVLRGLAKGGKFANAGGGGSEAAAKGGGGSKKKNDQIAAALVLRGVAKSGKFAGAGGGGSEAAAKGGGGSITRNDEIAAAIVLRGMAKGGRFFASGGG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:51)
[INFO] Main: Simulation completed successfully. (00:03:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5882 | |
| 2 | G | A | -0.9232 | |
| 3 | S | A | -1.1349 | |
| 4 | H | A | -2.3416 | |
| 5 | H | A | -2.8043 | |
| 6 | H | A | -3.1573 | |
| 7 | H | A | -3.0935 | |
| 8 | H | A | -3.6075 | |
| 9 | H | A | -3.6681 | |
| 10 | M | A | -2.7020 | |
| 11 | K | A | -3.4452 | |
| 12 | K | A | -3.8344 | |
| 13 | D | A | -3.3197 | |
| 14 | D | A | -2.5888 | |
| 15 | Q | A | -1.4518 | |
| 16 | I | A | -0.0853 | |
| 17 | A | A | -0.0024 | |
| 18 | A | A | 0.0000 | |
| 19 | A | A | 0.7837 | |
| 20 | I | A | 1.5003 | |
| 21 | A | A | 0.8076 | |
| 22 | L | A | 0.0000 | |
| 23 | R | A | -1.7954 | |
| 24 | G | A | -1.1407 | |
| 25 | M | A | -1.5731 | |
| 26 | A | A | 0.0000 | |
| 27 | K | A | -3.9056 | |
| 28 | D | A | -3.9858 | |
| 29 | G | A | 0.0000 | |
| 30 | K | A | -2.6414 | |
| 31 | F | A | -0.8543 | |
| 32 | A | A | -0.8267 | |
| 33 | V | A | -0.5727 | |
| 34 | K | A | -2.0645 | |
| 35 | G | A | -1.7585 | |
| 36 | G | A | -1.4406 | |
| 37 | G | A | 0.0000 | |
| 38 | G | A | -1.0912 | |
| 39 | S | A | -0.8418 | |
| 40 | E | A | 0.0000 | |
| 41 | A | A | -1.0474 | |
| 42 | A | A | -0.8579 | |
| 43 | A | A | -1.3280 | |
| 44 | K | A | -2.0514 | |
| 45 | G | A | -1.3873 | |
| 46 | G | A | -1.4973 | |
| 47 | G | A | -1.5321 | |
| 48 | G | A | 0.0000 | |
| 49 | S | A | -1.8081 | |
| 50 | Q | A | -3.5636 | |
| 51 | N | A | -3.9071 | |
| 52 | K | A | -4.5224 | |
| 53 | N | A | -3.1672 | |
| 54 | D | A | -2.4635 | |
| 55 | Q | A | 0.0000 | |
| 56 | I | A | -0.3168 | |
| 57 | A | A | 0.6831 | |
| 58 | A | A | 0.0000 | |
| 59 | A | A | 0.0000 | |
| 60 | I | A | 2.8467 | |
| 61 | V | A | 2.5080 | |
| 62 | L | A | 0.0000 | |
| 63 | R | A | 0.3701 | |
| 64 | G | A | -0.0749 | |
| 65 | L | A | -0.5138 | |
| 66 | A | A | 0.0000 | |
| 67 | K | A | -2.3365 | |
| 68 | G | A | -2.0588 | |
| 69 | G | A | -1.2863 | |
| 70 | K | A | -1.8070 | |
| 71 | F | A | -0.6693 | |
| 72 | A | A | -0.9006 | |
| 73 | N | A | -1.0280 | |
| 74 | A | A | -1.2583 | |
| 75 | G | A | -1.5357 | |
| 76 | G | A | -1.3153 | |
| 77 | G | A | -1.1783 | |
| 78 | G | A | -1.3249 | |
| 79 | S | A | -1.6172 | |
| 80 | E | A | -2.3585 | |
| 81 | A | A | -1.3636 | |
| 82 | A | A | 0.0000 | |
| 83 | A | A | -1.7196 | |
| 84 | K | A | -2.3474 | |
| 85 | G | A | 0.0000 | |
| 86 | G | A | 0.0000 | |
| 87 | G | A | -1.7145 | |
| 88 | G | A | -2.1457 | |
| 89 | S | A | -2.6640 | |
| 90 | K | A | -3.3601 | |
| 91 | K | A | -3.3288 | |
| 92 | K | A | -2.7480 | |
| 93 | N | A | 0.0000 | |
| 94 | D | A | -2.5283 | |
| 95 | Q | A | -1.8861 | |
| 96 | I | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.1178 | |
| 99 | A | A | 0.0000 | |
| 100 | L | A | 0.0000 | |
| 101 | V | A | 2.4235 | |
| 102 | L | A | 1.8871 | |
| 103 | R | A | 0.8000 | |
| 104 | G | A | 0.9203 | |
| 105 | V | A | 1.7094 | |
| 106 | A | A | 0.1428 | |
| 107 | K | A | -1.8695 | |
| 108 | S | A | -1.7312 | |
| 109 | G | A | -1.7759 | |
| 110 | K | A | -2.1833 | |
| 111 | F | A | -0.8085 | |
| 112 | A | A | -1.0303 | |
| 113 | G | A | -0.8544 | |
| 114 | A | A | 0.0000 | |
| 115 | G | A | -1.1523 | |
| 116 | G | A | -1.4517 | |
| 117 | G | A | -1.4591 | |
| 118 | G | A | -1.5288 | |
| 119 | S | A | -1.5191 | |
| 120 | E | A | -2.6541 | |
| 121 | A | A | -1.8825 | |
| 122 | A | A | -1.5351 | |
| 123 | A | A | -1.8443 | |
| 124 | K | A | -2.2117 | |
| 125 | G | A | -1.7754 | |
| 126 | G | A | -1.5574 | |
| 127 | G | A | -1.9143 | |
| 128 | G | A | -1.4632 | |
| 129 | S | A | -0.8385 | |
| 130 | I | A | -0.3783 | |
| 131 | T | A | -1.0099 | |
| 132 | R | A | -2.5295 | |
| 133 | N | A | -2.4969 | |
| 134 | D | A | -1.7475 | |
| 135 | E | A | 0.0000 | |
| 136 | I | A | -0.8410 | |
| 137 | A | A | 0.0000 | |
| 138 | A | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | I | A | 0.0247 | |
| 141 | V | A | 0.0000 | |
| 142 | L | A | 0.0603 | |
| 143 | R | A | -0.8341 | |
| 144 | G | A | 0.0000 | |
| 145 | M | A | 0.0000 | |
| 146 | A | A | -1.3664 | |
| 147 | K | A | -2.2523 | |
| 148 | G | A | -1.6396 | |
| 149 | G | A | -1.1092 | |
| 150 | R | A | -1.3627 | |
| 151 | F | A | -0.0007 | |
| 152 | F | A | -0.0200 | |
| 153 | A | A | -0.5408 | |
| 154 | S | A | -1.0183 | |
| 155 | G | A | -1.4646 | |
| 156 | G | A | -1.0399 | |
| 157 | G | A | -0.9086 |