| Chain sequence(s) |
A: CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 26 | C | A | 1.1893 | |
| 27 | A | A | 1.3252 | |
| 28 | F | A | 1.0619 | |
| 29 | K | A | -1.1283 | |
| 30 | A | A | -1.4053 | |
| 31 | D | A | -2.2014 | |
| 32 | D | A | -2.3756 | |
| 33 | G | A | -2.0011 | |
| 34 | P | A | -1.3911 | |
| 35 | C | A | -0.9168 | |
| 36 | K | A | -1.2937 | |
| 37 | A | A | 0.1770 | |
| 38 | I | A | 1.6840 | |
| 39 | M | A | 0.4493 | |
| 40 | K | A | -1.1722 | |
| 41 | R | A | -1.7120 | |
| 42 | F | A | 0.0000 | |
| 43 | F | A | -1.0802 | |
| 44 | F | A | -0.1647 | |
| 45 | N | A | -0.0781 | |
| 46 | I | A | 1.1055 | |
| 47 | F | A | 1.5373 | |
| 48 | T | A | -0.1898 | |
| 49 | R | A | -1.4746 | |
| 50 | Q | A | -1.9858 | |
| 51 | C | A | -1.7424 | |
| 52 | E | A | -1.7767 | |
| 53 | E | A | -2.3249 | |
| 54 | F | A | -0.7838 | |
| 55 | I | A | 0.4935 | |
| 56 | Y | A | 0.0000 | |
| 57 | G | A | 0.0000 | |
| 58 | G | A | -0.6103 | |
| 59 | C | A | -1.4557 | |
| 60 | E | A | -2.4831 | |
| 61 | G | A | -2.4862 | |
| 62 | N | A | -1.7213 | |
| 63 | Q | A | -1.5638 | |
| 64 | N | A | 0.0000 | |
| 65 | R | A | -1.9473 | |
| 66 | F | A | 0.0000 | |
| 67 | E | A | -2.7384 | |
| 68 | S | A | -2.2964 | |
| 69 | L | A | -2.0607 | |
| 70 | E | A | -2.9953 | |
| 71 | E | A | -2.5140 | |
| 72 | C | A | 0.0000 | |
| 73 | K | A | -2.8471 | |
| 74 | K | A | -2.4873 | |
| 75 | M | A | -0.3527 | |
| 76 | C | A | -0.2205 |