Project name: b3e789313c20181

Status: done

Started: 2026-06-27 15:16:55
Settings
Chain sequence(s) A: KLDLKLDLKLDL
B: KLDLKLDLKLDL
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:47)
Show buried residues

Minimal score value
-2.5607
Maximal score value
0.3932
Average score
-1.3865
Total score value
-33.2768

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.9117
2 L A -0.7071
3 D A -2.4204
4 L A -0.7923
5 K A -2.5418
6 L A -1.0681
7 D A -2.5607
8 L A -0.6921
9 K A -2.1489
10 L A -0.6524
11 D A -1.6875
12 L A 0.3932
1 K B -1.7613
2 L B -0.4269
3 D B -2.2820
4 L B -0.7184
5 K B -2.4756
6 L B -0.9104
7 D B -2.5564
8 L B -0.8254
9 K B -2.2873
10 L B -0.8105
11 D B -1.7813
12 L B 0.3485
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Laboratory of Theory of Biopolymers 2018