| Chain sequence(s) |
A: RCRHQFQTQQRLRACQRVIRRWSQPPTLQRCCRQLRNVSPFCRCPSLRQAVQSAQQQQGQVGPQQVGHMYRVASRIPAICNLQPMRCPFR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:57)
[INFO] Main: Simulation completed successfully. (00:01:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 40 | R | A | -2.5555 | |
| 41 | C | A | -1.9368 | |
| 42 | R | A | -3.4130 | |
| 43 | H | A | -3.1070 | |
| 44 | Q | A | -2.7153 | |
| 45 | F | A | 0.0000 | |
| 46 | Q | A | -3.0826 | |
| 47 | T | A | -2.1679 | |
| 48 | Q | A | -2.8966 | |
| 49 | Q | A | -2.9408 | |
| 50 | R | A | -3.4677 | |
| 51 | L | A | 0.0000 | |
| 52 | R | A | -3.4233 | |
| 53 | A | A | 0.0000 | |
| 54 | C | A | 0.0000 | |
| 55 | Q | A | 0.0000 | |
| 56 | R | A | -3.1932 | |
| 57 | V | A | 0.0000 | |
| 58 | I | A | 0.0000 | |
| 59 | R | A | -2.9824 | |
| 60 | R | A | -2.7765 | |
| 61 | W | A | -1.3246 | |
| 62 | S | A | 0.0000 | |
| 63 | Q | A | -1.8533 | |
| 93 | P | A | -0.8148 | |
| 94 | P | A | -0.8373 | |
| 95 | T | A | -1.4254 | |
| 96 | L | A | -0.9558 | |
| 97 | Q | A | -1.8049 | |
| 98 | R | A | -2.6257 | |
| 99 | C | A | 0.0000 | |
| 100 | C | A | -2.0842 | |
| 101 | R | A | -3.4519 | |
| 102 | Q | A | -3.2662 | |
| 103 | L | A | 0.0000 | |
| 104 | R | A | -3.6170 | |
| 105 | N | A | -2.8226 | |
| 106 | V | A | 0.0000 | |
| 107 | S | A | -0.5045 | |
| 108 | P | A | 0.0525 | |
| 109 | F | A | 1.5201 | |
| 110 | C | A | 0.0000 | |
| 111 | R | A | 0.0000 | |
| 112 | C | A | -0.5149 | |
| 113 | P | A | -0.8957 | |
| 114 | S | A | 0.0000 | |
| 115 | L | A | 0.0000 | |
| 116 | R | A | -2.0956 | |
| 117 | Q | A | -2.0936 | |
| 118 | A | A | 0.0000 | |
| 119 | V | A | 0.0000 | |
| 120 | Q | A | -1.9255 | |
| 121 | S | A | -2.0262 | |
| 122 | A | A | 0.0000 | |
| 123 | Q | A | -1.9928 | |
| 124 | Q | A | -2.4086 | |
| 125 | Q | A | -2.6425 | |
| 126 | Q | A | -1.8131 | |
| 127 | G | A | -1.6275 | |
| 128 | Q | A | -1.7986 | |
| 129 | V | A | -1.0591 | |
| 130 | G | A | -1.1526 | |
| 131 | P | A | -1.2038 | |
| 132 | Q | A | -1.7074 | |
| 133 | Q | A | -1.9026 | |
| 134 | V | A | -1.3381 | |
| 135 | G | A | -1.3987 | |
| 136 | H | A | -2.1291 | |
| 137 | M | A | 0.0000 | |
| 138 | Y | A | -1.6872 | |
| 139 | R | A | -2.5471 | |
| 140 | V | A | -1.6425 | |
| 141 | A | A | 0.0000 | |
| 142 | S | A | -2.2028 | |
| 143 | R | A | -2.3556 | |
| 144 | I | A | 0.0000 | |
| 145 | P | A | 0.0000 | |
| 146 | A | A | -1.0866 | |
| 147 | I | A | 0.0028 | |
| 148 | C | A | -1.0075 | |
| 149 | N | A | -1.3433 | |
| 150 | L | A | 0.0000 | |
| 151 | Q | A | -1.6409 | |
| 152 | P | A | -1.0182 | |
| 153 | M | A | -1.5130 | |
| 154 | R | A | -2.4897 | |
| 155 | C | A | 0.0000 | |
| 156 | P | A | -1.3120 | |
| 157 | F | A | -1.4712 | |
| 158 | R | A | -1.7369 |