| Chain sequence(s) |
B: MKTVSLSRVMTPEDAGQLFRWGFSSSPSTEALEASARANPEVFTLRLVPP
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:18)
[INFO] Main: Simulation completed successfully. (00:00:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 0.2509 | |
| 2 | K | B | -1.0265 | |
| 3 | T | B | -0.0546 | |
| 4 | V | B | 0.8770 | |
| 5 | S | B | 0.6164 | |
| 6 | L | B | 1.1140 | |
| 7 | S | B | 0.2147 | |
| 8 | R | B | 0.0127 | |
| 9 | V | B | 1.2986 | |
| 10 | M | B | 0.7044 | |
| 11 | T | B | -0.2930 | |
| 12 | P | B | -0.8843 | |
| 13 | E | B | -2.0532 | |
| 14 | D | B | 0.0000 | |
| 15 | A | B | -1.0740 | |
| 16 | G | B | -1.3190 | |
| 17 | Q | B | -1.3973 | |
| 18 | L | B | 0.7915 | |
| 19 | F | B | 0.1592 | |
| 20 | R | B | -1.4070 | |
| 21 | W | B | -0.2257 | |
| 22 | G | B | 0.0805 | |
| 23 | F | B | 1.8406 | |
| 24 | S | B | 0.5729 | |
| 25 | S | B | 0.1979 | |
| 26 | S | B | -0.1581 | |
| 27 | P | B | -0.2414 | |
| 28 | S | B | -0.8267 | |
| 29 | T | B | -1.1137 | |
| 30 | E | B | -2.0687 | |
| 31 | A | B | -0.9539 | |
| 32 | L | B | -0.2927 | |
| 33 | E | B | -1.8732 | |
| 34 | A | B | -1.2420 | |
| 35 | S | B | -0.6814 | |
| 36 | A | B | -1.3910 | |
| 37 | R | B | -2.4675 | |
| 38 | A | B | -1.2519 | |
| 39 | N | B | -1.3747 | |
| 40 | P | B | -1.4075 | |
| 41 | E | B | -1.8401 | |
| 42 | V | B | 0.0016 | |
| 43 | F | B | 0.5313 | |
| 44 | T | B | 0.1632 | |
| 45 | L | B | -0.3820 | |
| 46 | R | B | -1.0091 | |
| 47 | L | B | 0.6571 | |
| 48 | V | B | 1.6439 | |
| 49 | P | B | 0.5495 | |
| 50 | P | B | 0.2257 |