Project name: b449002446935bf

Status: done

Started: 2025-06-03 05:20:35
Settings
Chain sequence(s) H: QVQLQESGPGLVKPSETLSLTCAVSGHSISHDHAWSWVRQPPGEGLEWIGFISYSGITNYNPSLQGRVTISRDNSKNTLYLQMNSLRAEDTAVYYCARSLARTTAMDYWGEGTLVTVSS
L: DIQMTQSPSSLSASVGDSVTITCQASTDISSHLNWYQQKPGKAPELLIYYGSHLLSGVPSRFSGSGSGTDFTFTISSLEAEDAATYYCGQGNRLPYTFGQGTKVEIE
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:07)
Show buried residues

Minimal score value
-2.8133
Maximal score value
1.8225
Average score
-0.677
Total score value
-152.9997

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5288
2 V H 0.0000
3 Q H -1.6046
4 L H 0.0000
5 Q H -1.8320
6 E H 0.0000
7 S H -0.6326
8 G H -0.4803
9 P H -0.1383
11 G H 0.1996
12 L H 0.6174
13 V H 0.0000
14 K H -1.6384
15 P H -1.6898
16 S H -1.4414
17 E H -1.6699
18 T H -1.2641
19 L H 0.0000
20 S H -0.7210
21 L H 0.0000
22 T H -0.4272
23 C H 0.0000
24 A H -0.9188
25 V H 0.0000
26 S H -1.3507
27 G H -1.2684
28 H H -1.1905
29 S H -1.2748
30 I H 0.0000
31 S H -1.3060
35 H H -1.4795
36 D H -1.0119
37 H H -0.7166
38 A H 0.0000
39 W H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.7297
45 P H -1.1887
46 P H -0.9457
47 G H -1.5252
48 E H -2.4741
49 G H -1.6447
50 L H 0.0000
51 E H -0.8588
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 F H 0.3554
56 I H 0.0000
57 S H 0.1586
58 Y H -0.1176
59 S H 0.1798
63 G H 0.6394
64 I H 1.8225
65 T H 0.7684
66 N H -0.0026
67 Y H -0.4748
68 N H -0.7665
69 P H -1.1163
70 S H -0.8112
71 L H 0.0000
72 Q H -1.7167
74 G H -1.3316
75 R H -1.2833
76 V H 0.0000
77 T H -0.6600
78 I H 0.0000
79 S H -0.2805
80 R H -1.1407
81 D H -1.7960
82 N H -2.4035
83 S H -1.9066
84 K H -2.4918
85 N H -1.9689
86 T H 0.0000
87 L H 0.0000
88 Y H -0.1158
89 L H 0.0000
90 Q H -0.8698
91 M H 0.0000
92 N H -1.2639
93 S H -1.3069
94 L H 0.0000
95 R H -2.3543
96 A H -1.6868
97 E H -2.2498
98 D H 0.0000
99 T H -0.6102
100 A H 0.0000
101 V H 0.2909
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H -0.1192
107 S H 0.0000
108 L H -0.3052
109 A H -0.8270
110 R H -2.0909
112 T H -1.2884
113 T H -0.4456
114 A H 0.0000
115 M H 0.0000
116 D H -0.1630
117 Y H -0.3062
118 W H -0.9524
119 G H 0.0000
120 E H -2.4609
121 G H -1.2284
122 T H -0.3706
123 L H 0.5726
124 V H 0.0000
125 T H -0.0823
126 V H 0.0000
127 S H -0.6063
128 S H -0.5835
1 D L -2.3921
2 I L 0.0000
3 Q L -2.0461
4 M L 0.0000
5 T L -1.2976
6 Q L 0.0000
7 S L -0.6378
8 P L -0.6725
9 S L -0.9664
10 S L -1.1946
11 L L -0.9971
12 S L -1.3369
13 A L -0.9334
14 S L -0.7275
15 V L 0.3630
16 G L -0.4432
17 D L -1.1843
18 S L -0.8599
19 V L 0.0000
20 T L -0.2664
21 I L 0.0000
22 T L -0.7399
23 C L 0.0000
24 Q L -2.2536
25 A L 0.0000
26 S L -1.7133
27 T L -2.0398
28 D L -2.6139
29 I L 0.0000
36 S L -1.1044
37 S L -0.8294
38 H L -1.0178
39 L L 0.0000
40 N L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -1.5381
45 K L -1.8758
46 P L -1.2176
47 G L -1.7468
48 K L -2.8133
49 A L -1.9172
50 P L 0.0000
51 E L -1.9667
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.3481
56 Y L 0.1203
57 G L 0.0000
65 S L -0.3808
66 H L -0.2974
67 L L 0.3140
68 L L 0.1151
69 S L -0.1947
70 G L -0.3648
71 V L -0.2246
72 P L -0.2622
74 S L -0.3782
75 R L -0.6472
76 F L 0.0000
77 S L -0.3731
78 G L -0.3025
79 S L -0.7685
80 G L -1.1097
83 S L -1.3269
84 G L -1.6495
85 T L -1.9884
86 D L -2.5013
87 F L 0.0000
88 T L -0.7419
89 F L 0.0000
90 T L -0.3004
91 I L 0.0000
92 S L -0.9182
93 S L -0.8698
94 L L 0.0000
95 E L -1.3254
96 A L -1.2184
97 E L -1.9241
98 D L 0.0000
99 A L -1.5085
100 A L 0.0000
101 T L -1.2701
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 G L 0.0000
106 Q L 0.0000
107 G L 0.0000
108 N L -1.9665
109 R L -2.6172
114 L L -1.0336
115 P L -1.0077
116 Y L -0.7745
117 T L -0.9793
118 F L 0.0000
119 G L 0.0000
120 Q L -1.9302
121 G L 0.0000
122 T L 0.0000
123 K L -2.1187
124 V L 0.0000
125 E L -2.3796
126 I L -1.5584
127 E L -1.8006
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Laboratory of Theory of Biopolymers 2018