| Chain sequence(s) |
A: LDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYDWTGKNWVYSHDGVSLHELLAAELTKALKTKLDLSSLAYSGK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:09)
[INFO] Main: Simulation completed successfully. (00:02:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 90 | L | A | 0.1469 | |
| 91 | D | A | -1.8537 | |
| 92 | E | A | -3.0008 | |
| 93 | T | A | -1.9192 | |
| 94 | T | A | -1.7506 | |
| 95 | Y | A | 0.0000 | |
| 96 | E | A | -3.0540 | |
| 97 | R | A | -3.3266 | |
| 98 | L | A | -2.2672 | |
| 99 | A | A | 0.0000 | |
| 100 | E | A | -3.7847 | |
| 101 | E | A | -3.2129 | |
| 102 | T | A | 0.0000 | |
| 103 | L | A | 0.0000 | |
| 104 | D | A | -3.0572 | |
| 105 | S | A | -1.9329 | |
| 106 | L | A | 0.0000 | |
| 107 | A | A | 0.0000 | |
| 108 | E | A | -3.1316 | |
| 109 | F | A | -2.0513 | |
| 110 | F | A | 0.0000 | |
| 111 | E | A | -3.7313 | |
| 112 | D | A | -3.6054 | |
| 113 | L | A | 0.0000 | |
| 114 | A | A | -2.6814 | |
| 115 | D | A | -2.9179 | |
| 116 | K | A | -1.9544 | |
| 117 | P | A | -0.8979 | |
| 118 | Y | A | -0.5327 | |
| 119 | T | A | -0.9466 | |
| 120 | F | A | -1.0611 | |
| 121 | E | A | -2.5312 | |
| 122 | D | A | -3.1401 | |
| 123 | Y | A | -2.5221 | |
| 124 | D | A | -2.9890 | |
| 125 | V | A | -1.8679 | |
| 126 | S | A | -0.4333 | |
| 127 | F | A | 0.1335 | |
| 128 | G | A | -0.1136 | |
| 129 | S | A | -0.3097 | |
| 130 | G | A | -0.6993 | |
| 131 | V | A | 0.5209 | |
| 132 | L | A | 0.0000 | |
| 133 | T | A | -0.1039 | |
| 134 | V | A | 0.0000 | |
| 135 | K | A | -2.2933 | |
| 136 | L | A | 0.0000 | |
| 137 | G | A | -2.0101 | |
| 138 | G | A | -1.5112 | |
| 139 | D | A | -1.9947 | |
| 140 | L | A | -0.7299 | |
| 141 | G | A | -1.0448 | |
| 142 | T | A | -0.9860 | |
| 143 | Y | A | 0.0000 | |
| 144 | V | A | 0.5038 | |
| 145 | I | A | 0.0000 | |
| 146 | N | A | -0.3458 | |
| 147 | K | A | -1.5013 | |
| 148 | Q | A | -1.3974 | |
| 149 | T | A | -1.9094 | |
| 150 | P | A | -1.5727 | |
| 151 | N | A | -2.3737 | |
| 152 | K | A | -2.4218 | |
| 153 | Q | A | -1.7391 | |
| 154 | I | A | 0.0000 | |
| 155 | W | A | -0.8124 | |
| 156 | L | A | 0.0000 | |
| 157 | S | A | -0.3528 | |
| 158 | S | A | 0.0000 | |
| 159 | P | A | -0.6332 | |
| 160 | S | A | -0.4332 | |
| 161 | S | A | -0.4578 | |
| 162 | G | A | -0.4959 | |
| 163 | P | A | -0.7437 | |
| 164 | K | A | -1.1759 | |
| 165 | R | A | -2.0499 | |
| 166 | Y | A | 0.0000 | |
| 167 | D | A | -1.1701 | |
| 168 | W | A | -0.4575 | |
| 169 | T | A | -0.9327 | |
| 170 | G | A | -1.1302 | |
| 171 | K | A | -2.0642 | |
| 172 | N | A | -1.1836 | |
| 173 | W | A | 0.0000 | |
| 174 | V | A | -0.9606 | |
| 175 | Y | A | -1.0773 | |
| 176 | S | A | -1.4904 | |
| 177 | H | A | -2.0914 | |
| 178 | D | A | -2.2622 | |
| 179 | G | A | -1.2315 | |
| 180 | V | A | -0.5911 | |
| 181 | S | A | 0.0000 | |
| 182 | L | A | 0.0000 | |
| 183 | H | A | 0.0000 | |
| 184 | E | A | -2.0354 | |
| 185 | L | A | -0.5582 | |
| 186 | L | A | 0.0000 | |
| 187 | A | A | -1.6548 | |
| 188 | A | A | -1.3885 | |
| 189 | E | A | -1.2018 | |
| 190 | L | A | 0.0000 | |
| 191 | T | A | -2.2409 | |
| 192 | K | A | -2.6170 | |
| 193 | A | A | -1.3115 | |
| 194 | L | A | 0.0000 | |
| 195 | K | A | -2.6159 | |
| 196 | T | A | -2.1140 | |
| 197 | K | A | -2.6817 | |
| 198 | L | A | -1.9932 | |
| 199 | D | A | -2.4234 | |
| 200 | L | A | 0.0000 | |
| 201 | S | A | -1.4859 | |
| 202 | S | A | -0.7872 | |
| 203 | L | A | -0.8193 | |
| 204 | A | A | -0.7029 | |
| 205 | Y | A | -0.6013 | |
| 206 | S | A | 0.0000 | |
| 207 | G | A | -1.6103 | |
| 208 | K | A | -2.1283 |