Project name: KGHKGHG4

Status: done

Started: 2026-05-21 14:34:38
Settings
Chain sequence(s) A: KGHKGHG
C: KGHKGHG
B: KGHKGHG
D: KGHKGHG
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:36)
Show buried residues

Minimal score value
-3.5948
Maximal score value
-1.4358
Average score
-2.7913
Total score value
-78.1561

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -2.4029
2 G A -2.1336
3 H A -2.9300
4 K A -3.2293
5 G A -2.9555
6 H A -3.4677
7 G A -3.1491
1 K B -2.4546
2 G B -2.5013
3 H B -2.8444
4 K B -3.2549
5 G B -3.0200
6 H B -3.3533
7 G B -2.8375
1 K C -2.2520
2 G C -2.4149
3 H C -3.0070
4 K C -3.3027
5 G C -2.4896
6 H C -1.9777
7 G C -1.4358
1 K D -2.8331
2 G D -2.4322
3 H D -2.8504
4 K D -3.2158
5 G D -2.7436
6 H D -3.0724
7 G D -3.5948
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Laboratory of Theory of Biopolymers 2018