| Chain sequence(s) |
H: EVQLLESGGGLVQPGGSLRLSCAVSGFTFNSFAMSWVRQAPGKGLEWVSAISGSGGGTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYFCAKDKILWFGEPVFDYWGQGTLVTVSS
L: EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:01:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9724 | |
| 2 | V | H | -0.9308 | |
| 3 | Q | H | -0.7288 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.9637 | |
| 6 | E | H | 0.3121 | |
| 7 | S | H | -0.2604 | |
| 8 | G | H | -0.7120 | |
| 9 | G | H | 0.1513 | |
| 11 | G | H | 0.8632 | |
| 12 | L | H | 1.4288 | |
| 13 | V | H | -0.0082 | |
| 14 | Q | H | -1.2904 | |
| 15 | P | H | -1.5428 | |
| 16 | G | H | -1.3787 | |
| 17 | G | H | -1.1195 | |
| 18 | S | H | -1.1175 | |
| 19 | L | H | -0.7669 | |
| 20 | R | H | -1.5847 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3251 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.1638 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -0.8236 | |
| 27 | G | H | -1.1328 | |
| 28 | F | H | -0.4866 | |
| 29 | T | H | -0.3363 | |
| 30 | F | H | 0.0000 | |
| 35 | N | H | -1.0718 | |
| 36 | S | H | 0.2644 | |
| 37 | F | H | 1.1295 | |
| 38 | A | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6528 | |
| 45 | A | H | -1.0270 | |
| 46 | P | H | -0.8266 | |
| 47 | G | H | -1.4858 | |
| 48 | K | H | -2.3993 | |
| 49 | G | H | -1.6050 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9139 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | A | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.8042 | |
| 58 | G | H | 0.0000 | |
| 59 | S | H | -0.3423 | |
| 62 | G | H | -0.5738 | |
| 63 | G | H | -0.5137 | |
| 64 | G | H | -0.0714 | |
| 65 | T | H | 0.2263 | |
| 66 | Y | H | 0.3064 | |
| 67 | Y | H | -0.6370 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -2.3954 | |
| 70 | S | H | -1.7002 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.3937 | |
| 74 | G | H | -1.6435 | |
| 75 | R | H | -1.3861 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6947 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4502 | |
| 80 | R | H | -1.0295 | |
| 81 | D | H | -1.5229 | |
| 82 | N | H | -1.7513 | |
| 83 | S | H | -1.6294 | |
| 84 | K | H | -2.4219 | |
| 85 | N | H | -1.9171 | |
| 86 | T | H | -1.0453 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4344 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0012 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2669 | |
| 93 | S | H | -1.1904 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.1647 | |
| 96 | A | H | -1.6544 | |
| 97 | E | H | -2.2025 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3585 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7402 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | K | H | -0.0054 | |
| 109 | I | H | 1.1658 | |
| 110 | L | H | 1.8588 | |
| 111 | W | H | 2.3726 | |
| 111A | F | H | 2.2879 | |
| 112A | G | H | 0.4398 | |
| 112 | E | H | -0.5602 | |
| 113 | P | H | 0.0000 | |
| 114 | V | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.2804 | |
| 117 | Y | H | 0.1049 | |
| 118 | W | H | -0.0711 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.9414 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.5310 | |
| 123 | L | H | 1.5358 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3475 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6505 | |
| 128 | S | H | -0.4549 | |
| 1 | E | L | -1.5221 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7254 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.7041 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7715 | |
| 8 | P | L | -0.3478 | |
| 9 | A | L | -0.4263 | |
| 10 | T | L | -0.5247 | |
| 11 | L | L | -0.2803 | |
| 12 | S | L | -0.4739 | |
| 13 | L | L | -0.6367 | |
| 14 | S | L | -0.8641 | |
| 15 | P | L | -1.2225 | |
| 16 | G | L | -1.5324 | |
| 17 | E | L | -1.9397 | |
| 18 | R | L | -2.4402 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6540 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.8476 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.2687 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.8527 | |
| 27 | Q | L | -1.4356 | |
| 28 | S | L | -1.1411 | |
| 29 | V | L | 0.0000 | |
| 36 | S | L | -0.3860 | |
| 37 | S | L | -0.2417 | |
| 38 | Y | L | 0.1782 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.1708 | |
| 46 | P | L | -0.9551 | |
| 47 | G | L | -1.3192 | |
| 48 | Q | L | -1.8035 | |
| 49 | A | L | -1.1218 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -0.9344 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.6861 | |
| 56 | D | L | -0.8598 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -1.1047 | |
| 66 | N | L | -1.7067 | |
| 67 | R | L | -1.7615 | |
| 68 | A | L | -1.1309 | |
| 69 | T | L | -0.7329 | |
| 70 | G | L | -0.6896 | |
| 71 | I | L | 0.0000 | |
| 72 | P | L | -0.4361 | |
| 74 | A | L | -0.3724 | |
| 75 | R | L | -0.6127 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.6648 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.7780 | |
| 80 | G | L | -0.9888 | |
| 83 | S | L | -0.9322 | |
| 84 | G | L | -0.9820 | |
| 85 | T | L | -1.6239 | |
| 86 | D | L | -2.0520 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7406 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5816 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.1975 | |
| 93 | S | L | -1.4759 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.7073 | |
| 96 | P | L | -1.0215 | |
| 97 | E | L | -1.7122 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.3219 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.3292 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | R | L | -0.6064 | |
| 108 | S | L | -0.4561 | |
| 109 | N | L | -1.1165 | |
| 114 | W | L | -0.3609 | |
| 115 | P | L | -0.7242 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | -0.1866 | |
| 118 | F | L | 0.0074 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.2684 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.7671 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.5045 | |
| 126 | I | L | 0.6512 | |
| 127 | K | L | -0.9727 |