Project name: query_structure

Status: done

Started: 2026-03-17 01:02:19
Settings
Chain sequence(s) A: SGAIGPAPIPGAVLCAAGISCTACGLAGTLLNMGLSGAIGPAPIPGAVLCAAGISCTACGLAGTLLSL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:07)
Show buried residues

Minimal score value
-0.2172
Maximal score value
3.007
Average score
1.3495
Total score value
91.7693

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -0.2172
2 G A -0.0971
3 A A 0.7611
4 I A 1.6118
5 G A 0.5233
6 P A 0.3548
7 A A 0.7320
8 P A 0.8592
9 I A 2.3230
10 P A 1.4085
11 G A 1.1548
12 A A 1.6521
13 V A 2.7527
14 L A 2.3618
15 C A 1.6744
16 A A 1.4704
17 A A 1.2905
18 G A 0.9951
19 I A 2.2241
20 S A 1.0146
21 C A 0.7322
22 T A 0.8219
23 A A 1.0256
24 C A 1.0185
25 G A 0.7616
26 L A 1.9799
27 A A 1.5834
28 G A 1.3357
29 T A 1.7798
30 L A 2.9407
31 L A 2.7117
32 N A 2.0757
33 M A 2.3743
34 G A 1.3670
35 L A 2.1478
36 S A 1.5540
37 G A 0.4623
38 A A 0.9875
39 I A 1.9135
40 G A 0.2965
41 P A 0.2876
42 A A 0.5607
43 P A 0.8930
44 I A 2.1866
45 P A 1.2898
46 G A 1.0490
47 A A 1.6868
48 V A 2.4784
49 L A 1.8092
50 C A 1.2613
51 A A 0.9829
52 A A 0.8634
53 G A 0.3936
54 I A 1.1079
55 S A 0.2915
56 C A 0.6360
57 T A 0.4952
58 A A 0.7253
59 C A 0.7740
60 G A 0.7261
61 L A 1.9601
62 A A 1.4505
63 G A 1.4158
64 T A 1.7678
65 L A 3.0070
66 L A 2.7743
67 S A 1.8069
68 L A 2.3691
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Laboratory of Theory of Biopolymers 2018