Project name: b4c6e53778a2fdb

Status: done

Started: 2025-06-03 05:08:58
Settings
Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCAASDFSLTTYGVHWVRQAPGKGLEWLGVIWSGGSTDYNAAFISRLTISKDNSKNTVYLQMNSLRAEDTAVYYCARDYGSTYVDAIDYWGQGTLVTVSS
L: DIVLTQSPDSLAVSLGERATINCRASESVESYGNRYMTWYQQKPGQPPKLLIYRAANLQSGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQSNEDPWTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:05)
Show buried residues

Minimal score value
-2.918
Maximal score value
1.6987
Average score
-0.5651
Total score value
-130.5435

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.5290
2 V H -1.7076
3 Q H -1.6473
4 L H 0.0000
5 V H 0.6391
6 E H 0.0000
7 S H -0.1849
8 G H -0.4441
9 G H 0.2363
11 G H 0.8287
12 L H 1.3742
13 V H -0.0557
14 Q H -1.3431
15 P H -1.6240
16 G H -1.4621
17 G H -1.2189
18 S H -1.1421
19 L H -0.6259
20 R H -1.2823
21 L H 0.0000
22 S H -0.2710
23 C H 0.0000
24 A H -0.1686
25 A H -0.7148
26 S H -1.5277
27 D H -2.5303
28 F H 0.0000
29 S H -0.9149
30 L H 0.0000
35 T H -0.8721
36 T H -0.2839
37 Y H 0.0812
38 G H 0.0000
39 V H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6057
45 A H -1.0102
46 P H -0.9923
47 G H -1.4467
48 K H -2.3152
49 G H -1.4339
50 L H 0.0000
51 E H -0.9651
52 W H 0.0000
53 L H 0.0000
54 G H 0.0000
55 V H 0.0000
56 I H 0.0000
57 W H -0.1930
58 S H -0.3062
59 G H -0.5787
63 G H -0.7577
64 S H -0.6077
65 T H -0.6206
66 D H -0.7344
67 Y H 0.0789
68 N H -0.2409
69 A H 0.1475
70 A H 0.4783
71 F H 0.0000
72 I H 1.6987
74 S H 0.5105
75 R H -0.1288
76 L H 0.0000
77 T H -0.1639
78 I H 0.0000
79 S H -0.5121
80 K H -1.1407
81 D H -1.7751
82 N H -2.2949
83 S H -1.8562
84 K H -2.4750
85 N H -1.9663
86 T H -1.0398
87 V H 0.0000
88 Y H -0.3838
89 L H 0.0000
90 Q H -0.9147
91 M H 0.0000
92 N H -1.3065
93 S H -1.3117
94 L H 0.0000
95 R H -2.3875
96 A H -1.7185
97 E H -2.2784
98 D H 0.0000
99 T H -0.3248
100 A H 0.0000
101 V H 0.8688
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 D H 0.0000
108 Y H 0.3554
109 G H -0.0313
110 S H 0.0512
111 T H 0.2809
112A Y H 0.8772
112 V H 0.3994
113 D H 0.0000
114 A H 0.0000
115 I H 0.0000
116 D H -0.1480
117 Y H 0.0382
118 W H 0.0000
119 G H 0.0000
120 Q H -1.0654
121 G H -0.1709
122 T H 0.5621
123 L H 1.5685
124 V H 0.0000
125 T H 0.3395
126 V H 0.0000
127 S H -0.5382
128 S H -0.5608
1 D L -2.2195
2 I L 0.0000
3 V L 0.7107
4 L L 0.0000
5 T L -0.9558
6 Q L 0.0000
7 S L -1.5051
8 P L -1.3846
9 D L -2.3745
10 S L -1.5098
11 L L -0.8974
12 A L -0.7385
13 V L -1.0228
14 S L -0.9940
15 L L -0.0137
16 G L -1.1522
17 E L -2.5859
18 R L -2.5032
19 A L 0.0000
20 T L -0.8641
21 I L 0.0000
22 N L -1.8060
23 C L 0.0000
24 R L -2.4688
25 A L 0.0000
26 S L -0.9987
27 E L -1.6562
28 S L -1.5024
29 V L 0.0000
30 E L -1.2245
31 S L -0.2284
34 Y L 0.8673
35 G L -0.2881
36 N L -0.5478
37 R L -1.0385
38 Y L 0.0000
39 M L 0.0000
40 T L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.1361
46 P L -0.8013
47 G L -1.2780
48 Q L -1.7688
49 P L -1.1690
50 P L 0.0000
51 K L -1.1324
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.1925
56 R L -0.3159
57 A L 0.0000
65 A L -0.3230
66 N L -0.3141
67 L L -0.0671
68 Q L -0.4488
69 S L -0.4615
70 G L -0.7467
71 V L 0.0000
72 P L -1.0870
74 D L -1.9450
75 R L -1.4044
76 F L 0.0000
77 S L -0.6077
78 G L -0.3251
79 S L -0.8140
80 G L -1.2090
83 S L -1.2573
84 G L -1.4276
85 T L -1.8011
86 D L -2.2612
87 F L 0.0000
88 T L -1.0459
89 L L 0.0000
90 T L 0.0000
91 I L 0.0000
92 S L -1.6690
93 S L -1.6169
94 L L 0.0000
95 Q L -1.0885
96 A L -0.9013
97 E L -1.7841
98 D L 0.0000
99 V L -0.6058
100 A L 0.0000
101 V L -0.5182
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L 0.0000
108 N L -1.4476
109 E L -2.9180
114 D L -2.8928
115 P L -2.0728
116 W L 0.0000
117 T L -0.5889
118 F L 0.1359
119 G L 0.0000
120 Q L -1.3899
121 G L 0.0000
122 T L 0.0000
123 K L -1.4989
124 V L 0.0000
125 E L -1.1207
126 I L -0.7663
127 K L -1.5044
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Laboratory of Theory of Biopolymers 2018