Chain sequence(s) |
A: MKLLLWACIVCVAFARKSP
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12) [CRITICAL] pyMol: Pymol encountered an error: /bin/sh: pymol: command not found Movie creation failed. (00:00:12) [INFO] Main: Simulation completed successfully. (00:00:13) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | M | A | 1.5506 | |
2 | K | A | 0.6050 | |
3 | L | A | 2.5834 | |
4 | L | A | 3.3447 | |
5 | L | A | 3.1401 | |
6 | W | A | 3.3421 | |
7 | A | A | 2.9076 | |
8 | C | A | 3.6764 | |
9 | I | A | 3.8540 | |
10 | V | A | 2.9962 | |
11 | C | A | 2.6673 | |
12 | V | A | 2.1010 | |
13 | A | A | 1.2606 | |
14 | F | A | 1.7491 | |
15 | A | A | 0.3508 | |
16 | R | A | -1.5737 | |
17 | K | A | -1.6275 | |
74 | S | A | -0.2129 | |
113 | P | A | -0.2549 |