| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIVKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTAPLHGGADMRVNFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRNGPEGHPLPDAPPPSPLYTPPPPSSPYWVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPLPNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9436 | |
| 2 | L | A | 1.9653 | |
| 3 | P | A | 0.8257 | |
| 4 | P | A | 0.3713 | |
| 5 | T | A | 0.1231 | |
| 6 | T | A | 0.1300 | |
| 7 | P | A | 0.1913 | |
| 8 | V | A | 1.2118 | |
| 9 | A | A | 0.0926 | |
| 10 | K | A | -1.0208 | |
| 11 | V | A | -0.1612 | |
| 12 | Q | A | -1.4041 | |
| 13 | S | A | -1.5559 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4290 | |
| 16 | E | A | -2.4433 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4554 | |
| 20 | P | A | 0.1265 | |
| 21 | T | A | 0.1783 | |
| 22 | S | A | -0.0956 | |
| 23 | L | A | 0.1153 | |
| 24 | F | A | -0.0253 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3054 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9118 | |
| 31 | R | A | -2.6973 | |
| 32 | L | A | -0.8099 | |
| 33 | L | A | 1.1501 | |
| 34 | T | A | 1.3581 | |
| 35 | V | A | 1.8241 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6761 | |
| 40 | R | A | -1.7044 | |
| 41 | D | A | -0.9340 | |
| 42 | I | A | 0.8064 | |
| 43 | V | A | 0.8651 | |
| 44 | K | A | -1.4325 | |
| 45 | D | A | -2.4480 | |
| 46 | G | A | -1.4977 | |
| 47 | K | A | -1.1528 | |
| 48 | V | A | 1.3091 | |
| 49 | V | A | 1.9258 | |
| 50 | V | A | 1.2333 | |
| 51 | P | A | 0.4289 | |
| 52 | K | A | -0.6457 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1609 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4158 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2740 | |
| 70 | K | A | -1.7948 | |
| 71 | F | A | -0.6468 | |
| 72 | A | A | -0.5705 | |
| 73 | L | A | -0.8524 | |
| 74 | P | A | -1.2678 | |
| 75 | Q | A | -2.5019 | |
| 76 | K | A | -3.1054 | |
| 77 | D | A | -2.9914 | |
| 78 | F | A | -1.6603 | |
| 79 | Y | A | -1.8904 | |
| 80 | D | A | -2.6891 | |
| 81 | P | A | -2.3033 | |
| 82 | E | A | -3.0479 | |
| 83 | K | A | -3.3977 | |
| 84 | E | A | -2.4628 | |
| 85 | R | A | -1.2901 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6388 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9670 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3717 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6982 | |
| 99 | G | A | -0.5274 | |
| 100 | P | A | -0.3774 | |
| 101 | L | A | 0.1004 | |
| 102 | G | A | -0.1556 | |
| 103 | K | A | -0.5581 | |
| 104 | G | A | -0.4500 | |
| 105 | S | A | -0.5015 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1666 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1821 | |
| 110 | L | A | 0.0021 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1965 | |
| 113 | K | A | -0.5665 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -0.7599 | |
| 116 | D | A | -1.1170 | |
| 117 | T | A | -0.8182 | |
| 118 | E | A | -1.7406 | |
| 119 | N | A | -1.9543 | |
| 120 | P | A | -1.3248 | |
| 121 | T | A | -0.6669 | |
| 122 | A | A | -0.3748 | |
| 123 | P | A | 0.0869 | |
| 124 | L | A | -0.2049 | |
| 125 | H | A | -0.5418 | |
| 126 | G | A | -1.1979 | |
| 127 | G | A | -1.2549 | |
| 128 | A | A | -1.1204 | |
| 129 | D | A | -1.8569 | |
| 130 | M | A | -0.9459 | |
| 131 | R | A | -0.9764 | |
| 132 | V | A | -0.2288 | |
| 133 | N | A | -0.8868 | |
| 134 | F | A | -0.3749 | |
| 135 | S | A | -0.3934 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6081 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5655 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1994 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1266 | |
| 157 | D | A | 0.2910 | |
| 158 | I | A | 0.8234 | |
| 159 | A | A | 0.1099 | |
| 160 | E | A | -1.4797 | |
| 161 | P | A | -0.2262 | |
| 162 | C | A | 0.1842 | |
| 163 | P | A | -0.1818 | |
| 164 | G | A | -0.0976 | |
| 165 | L | A | 0.5556 | |
| 166 | P | A | -0.1336 | |
| 167 | P | A | -0.3486 | |
| 168 | G | A | -0.4306 | |
| 169 | A | A | -0.0379 | |
| 170 | C | A | 0.7351 | |
| 171 | P | A | 0.5510 | |
| 172 | P | A | 0.7832 | |
| 173 | I | A | 2.0432 | |
| 174 | Q | A | 0.8544 | |
| 175 | L | A | 1.4573 | |
| 176 | V | A | 0.8456 | |
| 177 | N | A | -0.2954 | |
| 178 | S | A | 0.0274 | |
| 179 | V | A | 0.4279 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3764 | |
| 182 | D | A | 0.0716 | |
| 183 | G | A | -0.1584 | |
| 184 | D | A | -0.5307 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1173 | |
| 190 | F | A | 0.0598 | |
| 191 | G | A | -0.1093 | |
| 192 | N | A | -0.2612 | |
| 193 | M | A | -0.1204 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3620 | |
| 197 | E | A | -2.5813 | |
| 198 | L | A | -1.1948 | |
| 199 | Q | A | -2.5355 | |
| 200 | Q | A | -3.3050 | |
| 201 | D | A | -3.5768 | |
| 202 | R | A | -3.3517 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.0279 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3956 | |
| 211 | S | A | -1.9055 | |
| 212 | T | A | -1.4364 | |
| 213 | R | A | -2.0482 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1561 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3441 | |
| 220 | L | A | 0.6105 | |
| 221 | K | A | -1.0973 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8110 | |
| 224 | N | A | -1.4911 | |
| 225 | E | A | -1.2356 | |
| 226 | A | A | -0.6049 | |
| 227 | Y | A | -0.3702 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6584 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0787 | |
| 234 | F | A | 0.2624 | |
| 235 | G | A | -0.8144 | |
| 236 | R | A | -2.5951 | |
| 237 | R | A | -2.8548 | |
| 238 | E | A | -2.1211 | |
| 239 | Q | A | -0.1876 | |
| 240 | V | A | 1.4563 | |
| 241 | Y | A | 1.1861 | |
| 242 | A | A | 0.3360 | |
| 243 | R | A | -0.7113 | |
| 244 | H | A | -0.8010 | |
| 245 | F | A | 0.1372 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.9227 | |
| 249 | N | A | -1.3563 | |
| 250 | G | A | -1.2954 | |
| 251 | P | A | -1.1624 | |
| 252 | E | A | -1.4644 | |
| 253 | G | A | -1.3129 | |
| 254 | H | A | -1.4870 | |
| 255 | P | A | -1.4046 | |
| 256 | L | A | -0.4084 | |
| 257 | P | A | -0.8990 | |
| 258 | D | A | -1.7362 | |
| 259 | A | A | -0.8605 | |
| 260 | P | A | -0.9327 | |
| 261 | P | A | -0.6198 | |
| 262 | P | A | -0.3203 | |
| 263 | S | A | -0.1841 | |
| 264 | P | A | 0.3988 | |
| 265 | L | A | 1.3192 | |
| 266 | Y | A | 0.6303 | |
| 267 | T | A | 0.0872 | |
| 268 | P | A | -0.1214 | |
| 269 | P | A | 0.3850 | |
| 270 | P | A | -0.1177 | |
| 271 | P | A | 0.1985 | |
| 272 | S | A | 0.1030 | |
| 273 | S | A | 0.6124 | |
| 274 | P | A | 0.7466 | |
| 275 | Y | A | 1.7295 | |
| 276 | W | A | 1.9183 | |
| 277 | V | A | 1.9987 | |
| 278 | R | A | 0.5131 | |
| 279 | P | A | -0.2128 | |
| 280 | P | A | -0.6739 | |
| 281 | T | A | -0.6866 | |
| 282 | D | A | -1.2252 | |
| 283 | Y | A | 0.7067 | |
| 284 | F | A | 0.6401 | |
| 285 | G | A | 0.3052 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9621 | |
| 291 | L | A | 1.6345 | |
| 292 | V | A | 0.6676 | |
| 293 | S | A | -0.1502 | |
| 294 | S | A | -0.9558 | |
| 295 | D | A | -1.8431 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1048 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6293 | |
| 301 | R | A | -1.8224 | |
| 302 | P | A | -0.9399 | |
| 303 | F | A | -0.1810 | |
| 304 | W | A | -0.5528 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0806 | |
| 307 | R | A | -2.8314 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2544 | |
| 310 | G | A | -1.2253 | |
| 311 | N | A | -1.2765 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8357 | |
| 319 | N | A | -0.9466 | |
| 320 | E | A | -1.0462 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3084 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0664 | |
| 333 | N | A | 0.5569 | |
| 334 | F | A | 1.7561 | |
| 335 | T | A | 0.8477 | |
| 336 | I | A | 0.3582 | |
| 337 | S | A | -1.0127 | |
| 338 | Q | A | -1.7255 | |
| 339 | Q | A | -1.0538 | |
| 340 | L | A | 0.5678 | |
| 341 | S | A | 0.3576 | |
| 342 | T | A | 0.1281 | |
| 343 | P | A | -0.0409 | |
| 344 | L | A | 0.7124 | |
| 345 | P | A | 0.1878 | |
| 346 | N | A | -0.1096 | |
| 347 | V | A | 1.6088 | |
| 348 | Y | A | 1.4511 | |
| 349 | D | A | -0.0394 | |
| 350 | P | A | -0.7139 | |
| 351 | S | A | -0.5371 | |
| 352 | N | A | -0.2032 | |
| 353 | F | A | -0.9515 | |
| 354 | K | A | -2.0046 | |
| 355 | N | A | -1.8375 | |
| 356 | Y | A | -0.1514 | |
| 357 | L | A | 0.6551 | |
| 358 | R | A | 0.9907 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3914 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0896 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0903 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6974 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3065 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3147 | |
| 376 | L | A | -1.7094 | |
| 377 | D | A | -1.9963 | |
| 378 | P | A | -1.0412 | |
| 379 | G | A | -1.0141 | |
| 380 | V | A | -0.9340 | |
| 381 | L | A | -0.5297 | |
| 382 | A | A | -0.6519 | |
| 383 | H | A | -0.8043 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4016 | |
| 386 | T | A | -0.5466 | |
| 387 | M | A | -0.2948 | |
| 388 | N | A | -0.8576 | |
| 389 | P | A | -1.2398 | |
| 390 | T | A | -1.4432 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4397 | |
| 393 | E | A | -2.7776 | |
| 394 | N | A | -2.4049 | |
| 395 | W | A | -1.3802 | |
| 396 | N | A | -1.1030 | |
| 397 | L | A | -0.1925 | |
| 398 | G | A | 0.5436 | |
| 399 | F | A | 2.4125 | |
| 400 | V | A | 1.8134 | |
| 401 | P | A | 0.0443 | |
| 402 | P | A | -1.8427 | |
| 403 | K | A | -3.3230 | |
| 404 | E | A | -3.7760 | |
| 405 | R | A | -3.9198 | |
| 406 | E | A | -3.7908 | |
| 407 | D | A | -2.8842 | |
| 408 | P | A | -1.7731 | |
| 409 | Y | A | -0.9901 | |
| 410 | K | A | -2.1286 | |
| 411 | G | A | -0.6375 | |
| 412 | L | A | 0.6727 | |
| 413 | I | A | 1.5832 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3995 | |
| 416 | E | A | -1.7023 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9618 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0694 | |
| 421 | E | A | -2.8034 | |
| 422 | R | A | -2.6789 | |
| 423 | F | A | -1.3049 | |
| 424 | S | A | -1.4845 | |
| 425 | Q | A | -1.8853 | |
| 426 | D | A | -2.9020 | |
| 427 | L | A | -1.9938 | |
| 428 | D | A | -2.7810 | |
| 429 | Q | A | -2.6242 | |
| 430 | F | A | -1.4452 | |
| 431 | A | A | -0.9188 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6278 | |
| 435 | K | A | -0.7408 | |
| 436 | F | A | 0.1274 | |
| 437 | L | A | 1.0134 | |
| 438 | Y | A | 0.8135 | |
| 439 | Q | A | -0.2842 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine