| Chain sequence(s) |
L: KAAHVCNPVGGYD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:17)
[INFO] Main: Simulation completed successfully. (00:00:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 42 | K | L | -1.6893 | |
| 43 | A | L | -0.2409 | |
| 44 | A | L | -0.1122 | |
| 45 | H | L | -0.6544 | |
| 46 | V | L | 1.6734 | |
| 47 | C | L | 0.5390 | |
| 48 | N | L | -1.2367 | |
| 49 | P | L | -0.2167 | |
| 50 | V | L | 1.6424 | |
| 51 | G | L | -0.2283 | |
| 52 | G | L | -0.3349 | |
| 53 | Y | L | 0.9067 | |
| 54 | D | L | -1.5525 |