| Chain sequence(s) |
A: ESCVYIPCFTAVVGCTCKDKVCYLNGTPCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:21)
[INFO] Main: Simulation completed successfully. (00:00:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -0.0716 | |
| 2 | S | A | 0.0936 | |
| 3 | C | A | 0.7216 | |
| 4 | V | A | 1.5003 | |
| 5 | Y | A | 2.0420 | |
| 6 | I | A | 1.5598 | |
| 7 | P | A | 1.0468 | |
| 8 | C | A | 0.0000 | |
| 9 | F | A | 2.4290 | |
| 10 | T | A | 2.0835 | |
| 11 | A | A | 2.1196 | |
| 12 | V | A | 2.9414 | |
| 13 | V | A | 2.7577 | |
| 14 | G | A | 1.1129 | |
| 15 | C | A | 0.0000 | |
| 16 | T | A | 0.0025 | |
| 17 | C | A | -0.4450 | |
| 18 | K | A | -2.1227 | |
| 19 | D | A | -2.6996 | |
| 20 | K | A | -1.8177 | |
| 21 | V | A | -1.0062 | |
| 22 | C | A | 0.0000 | |
| 23 | Y | A | -0.7905 | |
| 24 | L | A | -0.3336 | |
| 25 | N | A | -1.3646 | |
| 26 | G | A | -1.1559 | |
| 27 | T | A | -0.5777 | |
| 28 | P | A | -0.5689 | |
| 29 | C | A | 0.0924 | |
| 30 | G | A | -0.3888 |