Project name: b58cb53df7af28

Status: done

Started: 2024-12-20 12:05:20
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Chain sequence(s) J: SALTQPASVSGSPGQSITISCTATSSDVGAYQYVSWYQQYPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDDAYYYCNSYTTSSVVFGGGTKLTVL
input PDB
Selected Chain(s) J
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with J chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:41)
Show buried residues

Minimal score value
-2.5325
Maximal score value
2.556
Average score
-0.4543
Total score value
-49.0671

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 S J -0.1370
3 A J 0.1987
4 L J 0.0000
5 T J -0.0073
6 Q J 0.0000
7 P J -0.3445
8 A J -0.2835
9 S J -0.3286
11 V J 0.0563
12 S J 0.0211
13 G J 0.0000
14 S J -0.1659
15 P J -0.9088
16 G J -1.1343
17 Q J -1.4134
18 S J -0.8197
19 I J -0.0192
20 T J 0.0612
21 I J 0.0000
22 S J -0.3016
23 C J 0.0000
24 T J -0.5454
25 A J 0.0000
26 T J -0.5804
27 S J -0.9009
28 S J -1.2305
29 D J -2.1084
30 V J 0.0000
31 G J -1.4080
35 A J -0.9359
36 Y J 0.0000
37 Q J -1.3611
38 Y J 0.2236
39 V J 0.0000
40 S J 0.0000
41 W J 0.0000
42 Y J 0.4323
43 Q J 0.0000
44 Q J -0.6737
45 Y J -0.9778
46 P J -0.9041
47 G J -1.3245
48 K J -2.0443
49 A J -1.0445
50 P J -0.6618
51 K J -0.4795
52 L J 0.4920
53 M J 0.0000
54 I J 0.0000
55 Y J -0.7027
56 E J -2.1566
57 V J 0.0000
65 S J -1.7697
66 K J -2.5325
67 R J -1.7862
68 P J -0.9498
69 S J -0.8247
70 G J -0.5849
71 V J -0.2217
72 S J -0.8991
74 N J -1.7790
75 R J -1.5248
76 F J 0.0000
77 S J -1.0526
78 G J -1.1228
79 S J -1.1839
80 K J -1.8015
83 S J -1.1943
84 G J -1.6162
85 N J -1.9845
86 T J -1.2699
87 A J 0.0000
88 S J -0.5925
89 L J 0.0000
90 T J -0.2009
91 I J 0.0000
92 S J -1.1267
93 G J -1.2695
94 L J 0.0000
95 Q J -1.6818
96 A J -1.3133
97 E J -2.3543
98 D J -1.6260
99 D J -1.5718
100 A J 0.0000
101 Y J -0.0867
102 Y J 0.0000
103 Y J 0.5229
104 C J 0.0000
105 N J 0.0000
106 S J 0.0000
107 Y J 1.7181
108 T J 0.5705
109 T J -0.1421
114 S J 0.1203
115 S J 0.8166
116 V J 2.5560
117 V J 2.0646
118 F J 2.2948
119 G J 0.6400
120 G J -0.1043
121 G J -0.0005
122 T J 0.0000
123 K J -0.6899
124 L J 0.0000
125 T J -0.3404
126 V J 0.0044
127 L J 1.2422
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Laboratory of Theory of Biopolymers 2018