Project name: b5a41b087bc1913

Status: done

Started: 2026-03-03 00:40:50
Settings
Chain sequence(s) H: QIQLVQSGPELKKPGETVKISCEASGYTFTNYVMNWVKQAPGKGLKWMGWINTYTGEPAYADDFKGRFAFSLETSATTAYLQINNLKNEDSATYFCARDSYYFGSSWYFDYWGQGTTLTVSS
L: DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYRYTGVPDRFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSTPFTFGSGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:18)
Show buried residues

Minimal score value
-3.4057
Maximal score value
2.4923
Average score
-0.535
Total score value
-122.5187

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.3750
2 I H -0.7309
3 Q H -0.8945
4 L H 0.0000
5 V H 0.3694
6 Q H 0.0000
7 S H -0.6192
8 G H -0.7697
9 P H -0.4625
11 E H -0.3017
12 L H 0.7735
13 K H -0.9957
14 K H -2.1559
15 P H -2.5689
16 G H -2.4605
17 E H -2.5168
18 T H -2.0081
19 V H 0.0000
20 K H -1.8240
21 I H 0.0000
22 S H -0.4247
23 C H 0.0000
24 E H -0.4574
25 A H 0.0000
26 S H -0.5870
27 G H -0.8768
28 Y H -0.4720
29 T H -0.3751
30 F H 0.0000
35 T H -0.0768
36 N H -0.7409
37 Y H 0.2430
38 V H 0.0000
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H -0.6939
44 Q H -1.0117
45 A H -1.3208
46 P H -1.0986
47 G H -1.4600
48 K H -2.2346
49 G H -1.3703
50 L H 0.0000
51 K H -1.0094
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 W H -0.1208
56 I H 0.0000
57 N H -0.5742
58 T H 0.0000
59 Y H 0.6888
62 T H -0.1237
63 G H -0.8749
64 E H -1.8059
65 P H -1.0150
66 A H -0.7646
67 Y H -1.0423
68 A H 0.0000
69 D H -3.4057
70 D H -3.2373
71 F H 0.0000
72 K H -3.0511
74 G H -1.9555
75 R H -1.6942
76 F H 0.0000
77 A H -0.7819
78 F H 0.0000
79 S H -0.7017
80 L H -0.4258
81 E H -1.1290
82 T H -0.4947
83 S H -0.5276
84 A H -0.5154
85 T H -0.5139
86 T H -0.4514
87 A H 0.0000
88 Y H -0.5345
89 L H 0.0000
90 Q H -1.2307
91 I H 0.0000
92 N H -1.9179
93 N H -2.5312
94 L H 0.0000
95 K H -3.2428
96 N H -3.0357
97 E H -2.8414
98 D H 0.0000
99 S H -1.2355
100 A H 0.0000
101 T H -0.4311
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 D H 0.0000
108 S H 1.0233
109 Y H 1.5273
110 Y H 2.4596
111 F H 2.4923
111A G H 0.8653
112A S H 0.8895
112 S H 0.0000
113 W H 1.1310
114 Y H 0.0000
115 F H 0.0000
116 D H 0.0000
117 Y H -0.1708
118 W H -0.3452
119 G H 0.0000
120 Q H -1.1818
121 G H -0.7491
122 T H 0.0000
123 T H -0.3807
124 L H 0.0000
125 T H -0.5158
126 V H 0.0000
127 S H -0.8972
128 S H -0.7248
1 D L -1.7777
2 I L 0.0000
3 V L 0.6129
4 M L 0.0000
5 T L -0.5694
6 Q L 0.0000
7 S L -1.1367
8 H L -1.4183
9 K L -1.4594
10 F L 0.3795
11 M L -0.1737
12 S L -0.4203
13 T L 0.0000
14 S L -0.4329
15 V L 0.5131
16 G L -0.5220
17 D L -1.2472
18 R L -2.1117
19 V L 0.0000
20 S L -0.5657
21 I L 0.0000
22 T L -0.9153
23 C L 0.0000
24 K L -2.1395
25 A L 0.0000
26 S L -1.2874
27 Q L -2.4425
28 D L -2.7541
29 V L 0.0000
36 S L -1.0061
37 T L -0.5331
38 A L 0.0720
39 V L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.8629
45 K L -1.1372
46 P L -0.7136
47 G L -1.1965
48 Q L -1.6534
49 S L 0.0000
50 P L 0.0000
51 K L -1.6393
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.5428
56 S L 0.3729
57 A L 0.0000
65 S L 0.2646
66 Y L 0.9958
67 R L -0.4120
68 Y L -0.0705
69 T L -0.1901
70 G L -0.7534
71 V L -0.7830
72 P L -1.2258
74 D L -2.1851
75 R L -1.6487
76 F L 0.0000
77 T L -0.4696
78 G L 0.0000
79 S L -0.4256
80 G L -1.0335
83 S L -1.2980
84 G L -1.8169
85 T L -2.2889
86 D L -2.5554
87 F L 0.0000
88 T L -0.7051
89 F L 0.0000
90 T L 0.0000
91 I L 0.0000
92 S L -1.6405
93 S L -1.2884
94 V L 0.0000
95 Q L -0.7414
96 A L -0.5690
97 E L -1.6099
98 D L 0.0000
99 L L -0.0469
100 A L 0.0000
101 V L 0.0636
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 H L 0.0000
108 Y L 0.7697
109 S L 0.1133
114 T L -0.2203
115 P L -0.9361
116 F L 0.0000
117 T L -0.0572
118 F L 0.0000
119 G L 0.0000
120 S L -0.9720
121 G L 0.0000
122 T L 0.0000
123 K L -0.5697
124 L L 0.0000
125 E L -0.4504
126 I L -0.1940
127 K L -1.3424
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Laboratory of Theory of Biopolymers 2018