| Chain sequence(s) |
H: QIQLVQSGPELKKPGETVKISCEASGYTFTNYVMNWVKQAPGKGLKWMGWINTYTGEPAYADDFKGRFAFSLETSATTAYLQINNLKNEDSATYFCARDSYYFGSSWYFDYWGQGTTLTVSS
L: DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYRYTGVPDRFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSTPFTFGSGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:17)
[INFO] Main: Simulation completed successfully. (00:02:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3750 | |
| 2 | I | H | -0.7309 | |
| 3 | Q | H | -0.8945 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.3694 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.6192 | |
| 8 | G | H | -0.7697 | |
| 9 | P | H | -0.4625 | |
| 11 | E | H | -0.3017 | |
| 12 | L | H | 0.7735 | |
| 13 | K | H | -0.9957 | |
| 14 | K | H | -2.1559 | |
| 15 | P | H | -2.5689 | |
| 16 | G | H | -2.4605 | |
| 17 | E | H | -2.5168 | |
| 18 | T | H | -2.0081 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.8240 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.4247 | |
| 23 | C | H | 0.0000 | |
| 24 | E | H | -0.4574 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.5870 | |
| 27 | G | H | -0.8768 | |
| 28 | Y | H | -0.4720 | |
| 29 | T | H | -0.3751 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.0768 | |
| 36 | N | H | -0.7409 | |
| 37 | Y | H | 0.2430 | |
| 38 | V | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | -0.6939 | |
| 44 | Q | H | -1.0117 | |
| 45 | A | H | -1.3208 | |
| 46 | P | H | -1.0986 | |
| 47 | G | H | -1.4600 | |
| 48 | K | H | -2.2346 | |
| 49 | G | H | -1.3703 | |
| 50 | L | H | 0.0000 | |
| 51 | K | H | -1.0094 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | W | H | -0.1208 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.5742 | |
| 58 | T | H | 0.0000 | |
| 59 | Y | H | 0.6888 | |
| 62 | T | H | -0.1237 | |
| 63 | G | H | -0.8749 | |
| 64 | E | H | -1.8059 | |
| 65 | P | H | -1.0150 | |
| 66 | A | H | -0.7646 | |
| 67 | Y | H | -1.0423 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -3.4057 | |
| 70 | D | H | -3.2373 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.0511 | |
| 74 | G | H | -1.9555 | |
| 75 | R | H | -1.6942 | |
| 76 | F | H | 0.0000 | |
| 77 | A | H | -0.7819 | |
| 78 | F | H | 0.0000 | |
| 79 | S | H | -0.7017 | |
| 80 | L | H | -0.4258 | |
| 81 | E | H | -1.1290 | |
| 82 | T | H | -0.4947 | |
| 83 | S | H | -0.5276 | |
| 84 | A | H | -0.5154 | |
| 85 | T | H | -0.5139 | |
| 86 | T | H | -0.4514 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.5345 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.2307 | |
| 91 | I | H | 0.0000 | |
| 92 | N | H | -1.9179 | |
| 93 | N | H | -2.5312 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -3.2428 | |
| 96 | N | H | -3.0357 | |
| 97 | E | H | -2.8414 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -1.2355 | |
| 100 | A | H | 0.0000 | |
| 101 | T | H | -0.4311 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | S | H | 1.0233 | |
| 109 | Y | H | 1.5273 | |
| 110 | Y | H | 2.4596 | |
| 111 | F | H | 2.4923 | |
| 111A | G | H | 0.8653 | |
| 112A | S | H | 0.8895 | |
| 112 | S | H | 0.0000 | |
| 113 | W | H | 1.1310 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | -0.1708 | |
| 118 | W | H | -0.3452 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1818 | |
| 121 | G | H | -0.7491 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.3807 | |
| 124 | L | H | 0.0000 | |
| 125 | T | H | -0.5158 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8972 | |
| 128 | S | H | -0.7248 | |
| 1 | D | L | -1.7777 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.6129 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.5694 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -1.1367 | |
| 8 | H | L | -1.4183 | |
| 9 | K | L | -1.4594 | |
| 10 | F | L | 0.3795 | |
| 11 | M | L | -0.1737 | |
| 12 | S | L | -0.4203 | |
| 13 | T | L | 0.0000 | |
| 14 | S | L | -0.4329 | |
| 15 | V | L | 0.5131 | |
| 16 | G | L | -0.5220 | |
| 17 | D | L | -1.2472 | |
| 18 | R | L | -2.1117 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.5657 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.9153 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -2.1395 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.2874 | |
| 27 | Q | L | -2.4425 | |
| 28 | D | L | -2.7541 | |
| 29 | V | L | 0.0000 | |
| 36 | S | L | -1.0061 | |
| 37 | T | L | -0.5331 | |
| 38 | A | L | 0.0720 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.8629 | |
| 45 | K | L | -1.1372 | |
| 46 | P | L | -0.7136 | |
| 47 | G | L | -1.1965 | |
| 48 | Q | L | -1.6534 | |
| 49 | S | L | 0.0000 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.6393 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.5428 | |
| 56 | S | L | 0.3729 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | 0.2646 | |
| 66 | Y | L | 0.9958 | |
| 67 | R | L | -0.4120 | |
| 68 | Y | L | -0.0705 | |
| 69 | T | L | -0.1901 | |
| 70 | G | L | -0.7534 | |
| 71 | V | L | -0.7830 | |
| 72 | P | L | -1.2258 | |
| 74 | D | L | -2.1851 | |
| 75 | R | L | -1.6487 | |
| 76 | F | L | 0.0000 | |
| 77 | T | L | -0.4696 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.4256 | |
| 80 | G | L | -1.0335 | |
| 83 | S | L | -1.2980 | |
| 84 | G | L | -1.8169 | |
| 85 | T | L | -2.2889 | |
| 86 | D | L | -2.5554 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7051 | |
| 89 | F | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.6405 | |
| 93 | S | L | -1.2884 | |
| 94 | V | L | 0.0000 | |
| 95 | Q | L | -0.7414 | |
| 96 | A | L | -0.5690 | |
| 97 | E | L | -1.6099 | |
| 98 | D | L | 0.0000 | |
| 99 | L | L | -0.0469 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | 0.0636 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | H | L | 0.0000 | |
| 108 | Y | L | 0.7697 | |
| 109 | S | L | 0.1133 | |
| 114 | T | L | -0.2203 | |
| 115 | P | L | -0.9361 | |
| 116 | F | L | 0.0000 | |
| 117 | T | L | -0.0572 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | S | L | -0.9720 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.5697 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.4504 | |
| 126 | I | L | -0.1940 | |
| 127 | K | L | -1.3424 |