| Chain sequence(s) |
A: GIPCGESCVFIPCITGIAGCSCKSKVCYRN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:26)
[INFO] Main: Simulation completed successfully. (00:00:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6520 | |
| 2 | I | A | 0.9197 | |
| 3 | P | A | 0.0183 | |
| 4 | C | A | 0.0376 | |
| 5 | G | A | -0.3811 | |
| 6 | E | A | 0.0469 | |
| 7 | S | A | 0.3515 | |
| 8 | C | A | 1.0409 | |
| 9 | V | A | 1.6586 | |
| 10 | F | A | 2.8068 | |
| 11 | I | A | 2.7625 | |
| 12 | P | A | 1.5512 | |
| 13 | C | A | 1.7303 | |
| 14 | I | A | 2.4910 | |
| 15 | T | A | 1.2578 | |
| 16 | G | A | 1.0967 | |
| 17 | I | A | 2.2235 | |
| 18 | A | A | 0.8376 | |
| 19 | G | A | -0.1780 | |
| 20 | C | A | 0.0000 | |
| 21 | S | A | -0.7271 | |
| 22 | C | A | -0.6821 | |
| 23 | K | A | -2.0399 | |
| 24 | S | A | -1.3974 | |
| 25 | K | A | -1.2703 | |
| 26 | V | A | -0.6864 | |
| 27 | C | A | 0.0000 | |
| 28 | Y | A | -0.8588 | |
| 29 | R | A | -1.8086 | |
| 30 | N | A | -1.7568 |