Project name: query_structure

Status: done

Started: 2025-11-29 10:03:22
Settings
Chain sequence(s) A: GIPCGESCVFIPCITGIAGCSCKSKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:26)
Show buried residues

Minimal score value
-2.0399
Maximal score value
2.8068
Average score
0.2797
Total score value
8.3924

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.6520
2 I A 0.9197
3 P A 0.0183
4 C A 0.0376
5 G A -0.3811
6 E A 0.0469
7 S A 0.3515
8 C A 1.0409
9 V A 1.6586
10 F A 2.8068
11 I A 2.7625
12 P A 1.5512
13 C A 1.7303
14 I A 2.4910
15 T A 1.2578
16 G A 1.0967
17 I A 2.2235
18 A A 0.8376
19 G A -0.1780
20 C A 0.0000
21 S A -0.7271
22 C A -0.6821
23 K A -2.0399
24 S A -1.3974
25 K A -1.2703
26 V A -0.6864
27 C A 0.0000
28 Y A -0.8588
29 R A -1.8086
30 N A -1.7568
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Laboratory of Theory of Biopolymers 2018