Project name: query_structure

Status: done

Started: 2026-03-16 23:24:29
Settings
Chain sequence(s) A: GIPCGESCVFIPCVTTVIGCSCKDKVCYNN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:15)
Show buried residues

Minimal score value
-2.8039
Maximal score value
3.0084
Average score
0.435
Total score value
13.0491

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.2795
2 I A 1.3165
3 P A 0.3106
4 C A 0.5002
5 G A -0.2877
6 E A 0.0284
7 S A 0.3286
8 C A 0.9957
9 V A 2.2922
10 F A 2.9381
11 I A 2.2039
12 P A 1.3492
13 C A 0.0000
14 V A 2.4244
15 T A 1.9562
16 T A 1.9092
17 V A 3.0084
18 I A 2.8742
19 G A 0.9461
20 C A 0.0000
21 S A -0.4657
22 C A -0.7798
23 K A -2.6426
24 D A -2.8039
25 K A -1.7183
26 V A -1.0884
27 C A 0.0000
28 Y A -0.6083
29 N A -0.3740
30 N A -1.2846
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Laboratory of Theory of Biopolymers 2018