| Chain sequence(s) |
A: GWCGDPGATCGKLRLYCCSGFCDSYTKTCKDKSSA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:28)
[INFO] Main: Simulation completed successfully. (00:00:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.3260 | |
| 2 | W | A | 1.4389 | |
| 3 | C | A | 1.1233 | |
| 4 | G | A | -0.0527 | |
| 5 | D | A | -1.7361 | |
| 6 | P | A | -1.8205 | |
| 7 | G | A | -1.3746 | |
| 8 | A | A | -1.0015 | |
| 9 | T | A | -1.1301 | |
| 10 | C | A | -0.7704 | |
| 11 | G | A | -1.2953 | |
| 12 | K | A | -1.8223 | |
| 13 | L | A | -0.3757 | |
| 14 | R | A | -0.9067 | |
| 15 | L | A | 0.9058 | |
| 16 | Y | A | 1.7254 | |
| 17 | C | A | 0.4926 | |
| 18 | C | A | 0.5309 | |
| 19 | S | A | -0.9365 | |
| 20 | G | A | -0.5431 | |
| 21 | F | A | -0.6272 | |
| 22 | C | A | -0.3975 | |
| 23 | D | A | 0.0000 | |
| 24 | S | A | -0.2381 | |
| 25 | Y | A | 0.7941 | |
| 26 | T | A | -0.2720 | |
| 27 | K | A | -1.5377 | |
| 28 | T | A | -0.9408 | |
| 29 | C | A | 0.0000 | |
| 30 | K | A | -2.6573 | |
| 31 | D | A | -3.2418 | |
| 32 | K | A | -2.9086 | |
| 33 | S | A | -1.6181 | |
| 34 | S | A | -0.8572 | |
| 35 | A | A | -0.2673 |