Project name: query_structure

Status: done

Started: 2026-03-16 23:47:33
Settings
Chain sequence(s) A: GWCGDPGATCGKLRLYCCSGFCDSYTKTCKDKSSA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:28)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:28)
Show buried residues

Minimal score value
-3.2418
Maximal score value
1.7254
Average score
-0.6283
Total score value
-21.9921

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.3260
2 W A 1.4389
3 C A 1.1233
4 G A -0.0527
5 D A -1.7361
6 P A -1.8205
7 G A -1.3746
8 A A -1.0015
9 T A -1.1301
10 C A -0.7704
11 G A -1.2953
12 K A -1.8223
13 L A -0.3757
14 R A -0.9067
15 L A 0.9058
16 Y A 1.7254
17 C A 0.4926
18 C A 0.5309
19 S A -0.9365
20 G A -0.5431
21 F A -0.6272
22 C A -0.3975
23 D A 0.0000
24 S A -0.2381
25 Y A 0.7941
26 T A -0.2720
27 K A -1.5377
28 T A -0.9408
29 C A 0.0000
30 K A -2.6573
31 D A -3.2418
32 K A -2.9086
33 S A -1.6181
34 S A -0.8572
35 A A -0.2673
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Laboratory of Theory of Biopolymers 2018