Chain sequence(s) |
A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:41) [INFO] Main: Simulation completed successfully. (00:02:42) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | M | A | 0.8407 | |
2 | D | A | 0.0838 | |
3 | V | A | 1.8138 | |
4 | F | A | 1.9626 | |
5 | M | A | 0.8057 | |
6 | K | A | -0.8530 | |
7 | G | A | -0.6581 | |
8 | L | A | -0.3578 | |
9 | S | A | -1.8919 | |
10 | K | A | -2.7982 | |
11 | A | A | -1.6857 | |
12 | K | A | -1.9480 | |
13 | E | A | -2.1535 | |
14 | G | A | -0.6656 | |
15 | V | A | 0.9282 | |
16 | V | A | 0.8509 | |
17 | A | A | -0.5522 | |
18 | A | A | -0.8480 | |
19 | A | A | -1.1231 | |
20 | E | A | -2.9638 | |
21 | K | A | -3.2229 | |
22 | T | A | -2.1466 | |
23 | K | A | -3.3185 | |
24 | Q | A | -3.2108 | |
25 | G | A | -1.9338 | |
26 | V | A | -0.3219 | |
27 | A | A | -1.4315 | |
28 | E | A | -2.5943 | |
29 | A | A | -1.4519 | |
30 | A | A | -1.4590 | |
31 | G | A | -2.4675 | |
32 | K | A | -3.0327 | |
33 | T | A | -2.0449 | |
34 | K | A | -2.5502 | |
35 | E | A | -1.4056 | |
36 | G | A | -0.3021 | |
37 | V | A | 1.6739 | |
38 | L | A | 2.1494 | |
39 | Y | A | 2.0180 | |
40 | V | A | 0.6298 | |
41 | G | A | -0.5366 | |
42 | S | A | -1.1458 | |
43 | K | A | -2.0404 | |
44 | T | A | -1.7482 | |
45 | K | A | -2.4359 | |
46 | E | A | -2.3911 | |
47 | G | A | -1.2998 | |
48 | V | A | 0.5007 | |
49 | V | A | 0.9630 | |
50 | H | A | 0.0520 | |
51 | G | A | 0.9342 | |
52 | V | A | 2.5242 | |
53 | A | A | 0.9716 | |
54 | T | A | 0.4435 | |
55 | V | A | 0.8150 | |
56 | A | A | -0.7904 | |
57 | E | A | -2.8842 | |
58 | K | A | -3.3661 | |
59 | T | A | -2.4563 | |
60 | K | A | -3.7033 | |
61 | E | A | -4.0515 | |
62 | Q | A | -2.9068 | |
63 | V | A | -0.5868 | |
64 | T | A | -1.6016 | |
65 | N | A | -1.5481 | |
66 | V | A | 0.5837 | |
67 | G | A | 0.4582 | |
68 | G | A | 0.6836 | |
69 | A | A | 1.5849 | |
70 | V | A | 3.0562 | |
71 | V | A | 3.0367 | |
72 | T | A | 1.9625 | |
73 | G | A | 2.1551 | |
74 | V | A | 2.9616 | |
75 | T | A | 1.4555 | |
76 | A | A | 0.9194 | |
77 | V | A | 1.3303 | |
78 | A | A | 0.3225 | |
79 | Q | A | -1.1702 | |
80 | K | A | -1.5492 | |
81 | T | A | -0.6799 | |
82 | V | A | 0.0319 | |
83 | E | A | -1.7249 | |
84 | G | A | -0.9811 | |
85 | A | A | 0.0946 | |
86 | G | A | -0.1830 | |
87 | S | A | 0.3206 | |
88 | I | A | 1.4864 | |
89 | A | A | 0.9228 | |
90 | A | A | 1.2356 | |
91 | A | A | 1.2745 | |
92 | T | A | 1.0202 | |
93 | G | A | 0.9125 | |
94 | F | A | 1.8629 | |
95 | V | A | 1.1823 | |
96 | K | A | -1.7131 | |
97 | K | A | -2.7409 | |
98 | D | A | -3.0747 | |
99 | Q | A | -2.2090 | |
100 | L | A | -0.6707 | |
101 | G | A | -1.6529 | |
102 | K | A | -2.9237 | |
103 | N | A | -3.5657 | |
104 | E | A | -3.8963 | |
105 | E | A | -3.7178 | |
106 | G | A | -2.2185 | |
107 | A | A | -1.7389 | |
108 | P | A | -1.8909 | |
109 | Q | A | -2.4855 | |
110 | E | A | -2.4456 | |
111 | G | A | -0.7328 | |
112 | I | A | 1.3057 | |
113 | L | A | 0.6626 | |
114 | E | A | -1.3292 | |
115 | D | A | -0.8255 | |
116 | M | A | 0.4695 | |
117 | P | A | 0.0503 | |
118 | V | A | 0.1012 | |
119 | D | A | -2.1865 | |
120 | P | A | -2.3665 | |
121 | D | A | -3.0072 | |
122 | N | A | -2.6697 | |
123 | E | A | -2.7004 | |
124 | A | A | -1.2631 | |
125 | Y | A | -0.3340 | |
126 | E | A | -2.0128 | |
127 | M | A | -0.8401 | |
128 | P | A | -1.2946 | |
129 | S | A | -1.6610 | |
130 | E | A | -2.7938 | |
131 | E | A | -2.7542 | |
132 | G | A | -2.0398 | |
133 | Y | A | -0.6750 | |
134 | Q | A | -1.8112 | |
135 | D | A | -2.2074 | |
136 | Y | A | -1.0889 | |
137 | E | A | -2.3465 | |
138 | P | A | -1.8129 | |
139 | E | A | -2.0778 | |
140 | A | A | -1.1262 |