| Chain sequence(s) |
H: EVLLVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVATISSGGGITYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTALYYCARILLLFYTMDYWGQGTSVTVSS
L: DIQMNQSPSSLSASLGDTITITCHASQNINVWLSWYQQKPGNIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQGQSYPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:06)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.6222 | |
| 2 | V | H | -0.3059 | |
| 3 | L | H | 0.5936 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.5375 | |
| 6 | E | H | -0.3118 | |
| 7 | S | H | -0.6623 | |
| 8 | G | H | -0.8240 | |
| 9 | G | H | -0.3958 | |
| 11 | G | H | 0.3522 | |
| 12 | L | H | 1.0626 | |
| 13 | V | H | -0.3125 | |
| 14 | K | H | -1.8734 | |
| 15 | P | H | -1.9710 | |
| 16 | G | H | -1.4624 | |
| 17 | G | H | -1.1728 | |
| 18 | S | H | -0.9139 | |
| 19 | L | H | -0.4845 | |
| 20 | K | H | -1.3785 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.4226 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.1552 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.4642 | |
| 27 | G | H | -0.7330 | |
| 28 | F | H | -0.2634 | |
| 29 | T | H | -0.2438 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.8175 | |
| 36 | S | H | -0.0635 | |
| 37 | Y | H | 0.3067 | |
| 38 | T | H | 0.5403 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | T | H | -2.0289 | |
| 46 | P | H | -1.9775 | |
| 47 | E | H | -3.0876 | |
| 48 | K | H | -3.0565 | |
| 49 | R | H | -3.2433 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0836 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | T | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.2906 | |
| 58 | S | H | -0.1180 | |
| 59 | G | H | -0.5569 | |
| 62 | G | H | -0.2048 | |
| 63 | G | H | 0.2721 | |
| 64 | I | H | 1.7200 | |
| 65 | T | H | 1.0344 | |
| 66 | Y | H | 0.5796 | |
| 67 | Y | H | -0.5690 | |
| 68 | P | H | 0.0000 | |
| 69 | D | H | -2.4687 | |
| 70 | S | H | -1.7517 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5371 | |
| 74 | G | H | -1.6675 | |
| 75 | R | H | -1.5491 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7807 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2961 | |
| 80 | R | H | -1.0498 | |
| 81 | D | H | -1.6548 | |
| 82 | N | H | -1.7339 | |
| 83 | A | H | -1.4032 | |
| 84 | K | H | -2.3781 | |
| 85 | N | H | -1.8688 | |
| 86 | T | H | -1.1577 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4609 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.2611 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -0.9604 | |
| 93 | S | H | -1.0607 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.5320 | |
| 96 | S | H | -2.0877 | |
| 97 | E | H | -2.4369 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7615 | |
| 100 | A | H | 0.0000 | |
| 101 | L | H | -0.1028 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | I | H | 0.0000 | |
| 108 | L | H | 1.7262 | |
| 109 | L | H | 2.2597 | |
| 110 | L | H | 2.5697 | |
| 112 | F | H | 2.1463 | |
| 113 | Y | H | 2.0984 | |
| 114 | T | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.3248 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0530 | |
| 121 | G | H | -0.6362 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.2109 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.2271 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8038 | |
| 128 | S | H | -0.6760 | |
| 1 | D | L | -2.1803 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.3004 | |
| 4 | M | L | 0.0000 | |
| 5 | N | L | -1.7790 | |
| 6 | Q | L | -1.2216 | |
| 7 | S | L | -0.7672 | |
| 8 | P | L | -0.7357 | |
| 9 | S | L | -1.0010 | |
| 10 | S | L | -1.2214 | |
| 11 | L | L | -0.8857 | |
| 12 | S | L | -1.2841 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.7998 | |
| 15 | L | L | 0.1985 | |
| 16 | G | L | -0.4257 | |
| 17 | D | L | -0.7535 | |
| 18 | T | L | -0.4253 | |
| 19 | I | L | 0.0000 | |
| 20 | T | L | -0.1037 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.6369 | |
| 23 | C | L | 0.0000 | |
| 24 | H | L | -1.9004 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.9311 | |
| 27 | Q | L | -2.2403 | |
| 28 | N | L | -1.8979 | |
| 29 | I | L | 0.0000 | |
| 36 | N | L | -1.1211 | |
| 37 | V | L | -0.1427 | |
| 38 | W | L | 0.3007 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.1797 | |
| 45 | K | L | -1.6092 | |
| 46 | P | L | -0.9284 | |
| 47 | G | L | -1.1585 | |
| 48 | N | L | -1.7577 | |
| 49 | I | L | -1.1465 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.4342 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1178 | |
| 56 | K | L | -0.3304 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.5834 | |
| 66 | N | L | -0.7336 | |
| 67 | L | L | -0.0652 | |
| 68 | H | L | -0.2830 | |
| 69 | T | L | -0.2613 | |
| 70 | G | L | -0.3928 | |
| 71 | V | L | -0.2159 | |
| 72 | P | L | -0.2800 | |
| 74 | S | L | -0.3820 | |
| 75 | R | L | -0.6253 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4106 | |
| 78 | G | L | -0.4670 | |
| 79 | S | L | -0.6184 | |
| 80 | G | L | -0.7841 | |
| 83 | S | L | -0.8898 | |
| 84 | G | L | -1.2165 | |
| 85 | T | L | -1.3694 | |
| 86 | G | L | -1.3209 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.4936 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.2426 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -0.5505 | |
| 93 | S | L | -0.5704 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.9803 | |
| 96 | P | L | -1.3404 | |
| 97 | E | L | -1.9507 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -1.1525 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | 0.0000 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.3650 | |
| 108 | Q | L | -0.2437 | |
| 109 | S | L | -0.1904 | |
| 114 | Y | L | 0.0266 | |
| 115 | P | L | -0.5550 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.7758 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -2.0026 | |
| 121 | G | L | -1.5447 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.2070 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -2.1112 | |
| 126 | I | L | -1.2465 | |
| 127 | K | L | -1.7272 |