| Chain sequence(s) |
A: QLQLVESGGGWVQAGGSRRLSCAASGRTLDSYAVGWFRQAPGKEREWVSCSRSDGTTYQSDSMKGRFTISRDNTKNTVYLQMNSLKAEDTAVYYCASRRSYGCDYYGMEYWGKGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:29)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.8953 | |
| 2 | L | A | 0.0000 | |
| 3 | Q | A | -1.7411 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.1336 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.2039 | |
| 8 | G | A | -0.5914 | |
| 9 | G | A | 0.1222 | |
| 10 | G | A | 0.7530 | |
| 11 | W | A | 1.0361 | |
| 12 | V | A | -0.2954 | |
| 13 | Q | A | -1.3655 | |
| 14 | A | A | -1.4535 | |
| 15 | G | A | -1.3195 | |
| 16 | G | A | -1.2319 | |
| 17 | S | A | -1.6634 | |
| 18 | R | A | -1.8494 | |
| 19 | R | A | -2.4438 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5516 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.4332 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.2338 | |
| 26 | G | A | -1.7786 | |
| 27 | R | A | -2.1940 | |
| 28 | T | A | -1.8537 | |
| 29 | L | A | 0.0000 | |
| 30 | D | A | -2.9135 | |
| 31 | S | A | -2.0022 | |
| 32 | Y | A | 0.0000 | |
| 33 | A | A | 0.0000 | |
| 34 | V | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.7419 | |
| 40 | A | A | -1.7353 | |
| 41 | P | A | -1.6097 | |
| 42 | G | A | -1.9705 | |
| 43 | K | A | -3.3411 | |
| 44 | E | A | -3.5444 | |
| 45 | R | A | -2.7365 | |
| 46 | E | A | -1.7236 | |
| 47 | W | A | -0.7350 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | C | A | 0.0000 | |
| 51 | S | A | 0.0000 | |
| 52 | R | A | -1.1188 | |
| 53 | S | A | -1.8454 | |
| 54 | D | A | -2.1367 | |
| 55 | G | A | -1.4445 | |
| 56 | T | A | -0.5534 | |
| 57 | T | A | -0.2177 | |
| 58 | Y | A | 0.0301 | |
| 59 | Q | A | -1.1827 | |
| 60 | S | A | 0.0000 | |
| 61 | D | A | -2.5506 | |
| 62 | S | A | -1.7695 | |
| 63 | M | A | 0.0000 | |
| 64 | K | A | -2.7616 | |
| 65 | G | A | -1.9045 | |
| 66 | R | A | -1.4749 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.9156 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.5063 | |
| 71 | R | A | -1.2627 | |
| 72 | D | A | -1.7627 | |
| 73 | N | A | -2.0854 | |
| 74 | T | A | -1.6527 | |
| 75 | K | A | -2.2187 | |
| 76 | N | A | -1.9641 | |
| 77 | T | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.6403 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.4484 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.6104 | |
| 84 | S | A | -1.3003 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.2009 | |
| 87 | A | A | -1.6882 | |
| 88 | E | A | -2.2311 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.4260 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | 0.5052 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.0767 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | S | A | 0.0000 | |
| 98 | R | A | -2.1996 | |
| 99 | R | A | -2.5681 | |
| 100 | S | A | -0.9595 | |
| 101 | Y | A | -0.0310 | |
| 102 | G | A | -0.6541 | |
| 103 | C | A | -0.3312 | |
| 104 | D | A | -0.9428 | |
| 105 | Y | A | 0.5884 | |
| 106 | Y | A | 0.9827 | |
| 107 | G | A | -0.4662 | |
| 108 | M | A | 0.0000 | |
| 109 | E | A | -1.7577 | |
| 110 | Y | A | -1.1092 | |
| 111 | W | A | -0.3867 | |
| 112 | G | A | -0.5912 | |
| 113 | K | A | -1.5085 | |
| 114 | G | A | -0.2838 | |
| 115 | T | A | 0.4194 | |
| 116 | L | A | 1.5746 | |
| 117 | V | A | 0.0000 | |
| 118 | T | A | 0.3166 | |
| 119 | V | A | 0.0000 | |
| 120 | S | A | -0.7797 | |
| 121 | S | A | -0.7994 |