Project name: query_structure

Status: done

Started: 2026-03-16 20:10:36
Settings
Chain sequence(s) A: GAIEVKDVTDTTALITWAKPWVDPPPLWGCELTYGIKDVPGDRTTIDLQQKHTAYSIGNLKPDTEYEVSLICFDPYGMRSKPAKETFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:16)
Show buried residues

Minimal score value
-3.1806
Maximal score value
1.4357
Average score
-0.9115
Total score value
-81.1204

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.9772
2 A A -1.1179
3 I A 0.0000
4 E A -1.9551
5 V A -1.3679
6 K A -2.0518
7 D A -1.9706
8 V A -0.9265
9 T A -1.6122
10 D A -2.7725
11 T A -2.1349
12 T A -1.5383
13 A A 0.0000
14 L A -0.7712
15 I A 0.0000
16 T A -0.6442
17 W A 0.0000
18 A A -0.3696
19 K A -0.3959
20 P A 0.1425
21 W A 0.9766
22 V A 0.7330
23 D A -1.2453
24 P A -0.7154
25 P A -0.2228
26 P A 0.6603
27 L A 1.1670
28 W A 0.3389
29 G A 0.0000
30 C A 0.0000
31 E A -1.4658
32 L A 0.0000
33 T A -0.6762
34 Y A -0.6945
35 G A 0.0000
36 I A -1.5040
37 K A -2.1106
38 D A -2.1663
39 V A -0.9668
40 P A -1.0474
41 G A -1.1007
42 D A -1.4643
43 R A -1.1655
44 T A -0.5288
45 T A -0.7142
46 I A -0.9338
47 D A -2.3077
48 L A 0.0000
49 Q A -2.4066
50 Q A -1.8434
51 K A -2.4091
52 H A -1.8930
53 T A -0.8324
54 A A -0.3876
55 Y A 0.2090
56 S A -0.2749
57 I A 0.0000
58 G A -1.4039
59 N A -2.1648
60 L A 0.0000
61 K A -3.1806
62 P A -3.0174
63 D A -3.0952
64 T A 0.0000
65 E A -2.7161
66 Y A 0.0000
67 E A -1.6851
68 V A 0.0000
69 S A 0.0000
70 L A 0.0000
71 I A -1.0270
72 C A 0.0000
73 F A 0.1437
74 D A 0.0000
75 P A 0.9476
76 Y A 1.4357
77 G A 0.4422
78 M A 0.3716
79 R A -1.5351
80 S A -1.4591
81 K A -2.3087
82 P A -1.7647
83 A A -1.6694
84 K A -2.5025
85 E A -2.0131
86 T A -1.5151
87 F A 0.0000
88 T A -1.7184
89 T A -2.2294
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Laboratory of Theory of Biopolymers 2018