| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGSVSPGYMHWVRQAPGKGLEWVGLITIYDPKFQDRATISADNSKNTAYLQMNSLRAEDTAVYYCARASVGGGGLVLLTWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
L: DIQMTQSPSSLSASVGDRVTITCRLTSEPSSGGILSWYQQKPGKAPKVLIYGPNLEKPSGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCAYSKKKLTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:59)
[INFO] Main: Simulation completed successfully. (00:08:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9569 | |
| 2 | V | H | -1.1708 | |
| 3 | Q | H | -1.4890 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.2838 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4784 | |
| 8 | G | H | -0.8016 | |
| 9 | G | H | -0.4453 | |
| 10 | G | H | -0.3058 | |
| 11 | L | H | -0.1118 | |
| 12 | V | H | 0.0000 | |
| 13 | Q | H | -1.7328 | |
| 14 | P | H | -1.9347 | |
| 15 | G | H | -1.5768 | |
| 16 | G | H | -1.2604 | |
| 17 | S | H | -1.3714 | |
| 18 | L | H | -1.1260 | |
| 19 | R | H | -1.8353 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.4004 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.3643 | |
| 24 | A | H | -0.6157 | |
| 25 | S | H | -0.9746 | |
| 26 | G | H | -1.0206 | |
| 27 | S | H | -0.8149 | |
| 28 | V | H | 0.0000 | |
| 29 | S | H | -0.6628 | |
| 30 | P | H | 0.0000 | |
| 31 | G | H | -0.0963 | |
| 32 | Y | H | 0.9450 | |
| 33 | M | H | 0.0000 | |
| 34 | H | H | 0.0000 | |
| 35 | W | H | 0.0000 | |
| 36 | V | H | 0.0000 | |
| 37 | R | H | 0.0000 | |
| 38 | Q | H | -0.7298 | |
| 39 | A | H | -1.1648 | |
| 40 | P | H | -0.9890 | |
| 41 | G | H | -1.4787 | |
| 42 | K | H | -2.3234 | |
| 43 | G | H | -1.5081 | |
| 44 | L | H | 0.0000 | |
| 45 | E | H | -0.7094 | |
| 46 | W | H | 0.0000 | |
| 47 | V | H | 0.0000 | |
| 48 | G | H | 0.0000 | |
| 49 | L | H | 0.0000 | |
| 50 | I | H | 0.9575 | |
| 51 | T | H | 0.5428 | |
| 52 | I | H | 0.6738 | |
| 53 | Y | H | -0.5113 | |
| 54 | D | H | 0.0000 | |
| 55 | P | H | -1.7160 | |
| 56 | K | H | -2.4615 | |
| 57 | F | H | 0.0000 | |
| 58 | Q | H | -2.4536 | |
| 59 | D | H | -2.8912 | |
| 60 | R | H | -2.0327 | |
| 61 | A | H | 0.0000 | |
| 62 | T | H | -0.7244 | |
| 63 | I | H | 0.0000 | |
| 64 | S | H | -0.1498 | |
| 65 | A | H | -0.8001 | |
| 66 | D | H | -1.8786 | |
| 67 | N | H | -2.3771 | |
| 68 | S | H | -1.9212 | |
| 69 | K | H | -2.5001 | |
| 70 | N | H | -1.9206 | |
| 71 | T | H | -1.1462 | |
| 72 | A | H | 0.0000 | |
| 73 | Y | H | -0.4201 | |
| 74 | L | H | 0.0000 | |
| 75 | Q | H | -1.0762 | |
| 76 | M | H | 0.0000 | |
| 77 | N | H | -1.7263 | |
| 78 | S | H | -1.5566 | |
| 79 | L | H | 0.0000 | |
| 80 | R | H | -2.7780 | |
| 81 | A | H | -1.9545 | |
| 82 | E | H | -2.3784 | |
| 83 | D | H | 0.0000 | |
| 84 | T | H | -0.8224 | |
| 85 | A | H | 0.0000 | |
| 86 | V | H | 0.1217 | |
| 87 | Y | H | 0.0000 | |
| 88 | Y | H | 0.0000 | |
| 89 | C | H | 0.0000 | |
| 90 | A | H | 0.0000 | |
| 91 | R | H | -0.1457 | |
| 92 | A | H | 0.0000 | |
| 93 | S | H | 0.8647 | |
| 94 | V | H | 1.5907 | |
| 95 | G | H | 0.3268 | |
| 96 | G | H | -0.6428 | |
| 97 | G | H | -0.7473 | |
| 98 | G | H | 0.0000 | |
| 99 | L | H | 0.0592 | |
| 100 | V | H | 0.0000 | |
| 101 | L | H | 0.0000 | |
| 102 | L | H | 0.4422 | |
| 103 | T | H | -0.5409 | |
| 104 | W | H | -0.6131 | |
| 105 | G | H | 0.0000 | |
| 106 | Q | H | -1.5506 | |
| 107 | G | H | -0.6823 | |
| 108 | T | H | -0.1115 | |
| 109 | L | H | 0.0663 | |
| 110 | V | H | 0.0000 | |
| 111 | T | H | -0.5350 | |
| 112 | V | H | 0.0000 | |
| 113 | S | H | -1.0500 | |
| 114 | S | H | -0.7198 | |
| 115 | A | H | -0.4960 | |
| 116 | S | H | -0.6339 | |
| 117 | T | H | -0.8773 | |
| 118 | K | H | -1.4733 | |
| 119 | G | H | -1.4580 | |
| 120 | P | H | 0.0000 | |
| 121 | S | H | -0.4563 | |
| 122 | V | H | 0.0000 | |
| 123 | F | H | 0.0000 | |
| 124 | P | H | -1.1476 | |
| 125 | L | H | 0.0000 | |
| 126 | A | H | -1.2028 | |
| 127 | P | H | 0.0000 | |
| 128 | S | H | -1.0981 | |
| 129 | S | H | -0.9161 | |
| 130 | K | H | -1.3808 | |
| 131 | S | H | 0.0000 | |
| 132 | T | H | -0.8064 | |
| 133 | S | H | -0.8206 | |
| 134 | G | H | -0.8368 | |
| 135 | G | H | -0.8977 | |
| 136 | T | H | -0.6096 | |
| 137 | A | H | 0.0000 | |
| 138 | A | H | 0.0000 | |
| 139 | L | H | 0.0000 | |
| 140 | G | H | 0.0000 | |
| 141 | C | H | 0.0000 | |
| 142 | L | H | 0.0000 | |
| 143 | V | H | 0.0000 | |
| 144 | K | H | 0.0000 | |
| 145 | D | H | -0.4501 | |
| 146 | Y | H | 0.0000 | |
| 147 | F | H | 0.0000 | |
| 148 | P | H | 0.0000 | |
| 149 | E | H | -0.7050 | |
| 150 | P | H | -0.6865 | |
| 151 | V | H | -0.6891 | |
| 152 | T | H | -0.5845 | |
| 153 | V | H | -0.4188 | |
| 154 | S | H | -0.4205 | |
| 155 | W | H | 0.0000 | |
| 156 | N | H | -0.8812 | |
| 157 | S | H | -0.7293 | |
| 158 | G | H | -0.5386 | |
| 159 | A | H | -0.2746 | |
| 160 | L | H | 0.0013 | |
| 161 | T | H | -0.1605 | |
| 162 | S | H | -0.1418 | |
| 163 | G | H | -0.1314 | |
| 164 | V | H | 0.1915 | |
| 165 | H | H | -0.2519 | |
| 166 | T | H | -0.1424 | |
| 167 | F | H | 0.0000 | |
| 168 | P | H | -0.2245 | |
| 169 | A | H | 0.2671 | |
| 170 | V | H | 0.5860 | |
| 171 | L | H | 1.1495 | |
| 172 | Q | H | 0.2664 | |
| 173 | S | H | -0.1060 | |
| 174 | S | H | -0.2239 | |
| 175 | G | H | 0.0345 | |
| 176 | L | H | 0.0849 | |
| 177 | Y | H | 0.4366 | |
| 178 | S | H | 0.0000 | |
| 179 | L | H | 0.0000 | |
| 180 | S | H | 0.0000 | |
| 181 | S | H | 0.0000 | |
| 182 | V | H | 0.0000 | |
| 183 | V | H | 0.0000 | |
| 184 | T | H | -0.1052 | |
| 185 | V | H | 0.0000 | |
| 186 | P | H | -0.5397 | |
| 187 | S | H | -0.5680 | |
| 188 | S | H | -0.6120 | |
| 189 | S | H | 0.0000 | |
| 190 | L | H | -0.8418 | |
| 191 | G | H | -1.0314 | |
| 192 | T | H | -0.8268 | |
| 193 | Q | H | -1.4003 | |
| 194 | T | H | -1.2460 | |
| 195 | Y | H | 0.0000 | |
| 196 | I | H | -1.3107 | |
| 197 | C | H | 0.0000 | |
| 198 | N | H | -1.5324 | |
| 199 | V | H | 0.0000 | |
| 200 | N | H | -1.9389 | |
| 201 | H | H | 0.0000 | |
| 202 | K | H | -2.7309 | |
| 203 | P | H | -1.6158 | |
| 204 | S | H | -1.8817 | |
| 205 | N | H | -2.5954 | |
| 206 | T | H | -2.0922 | |
| 207 | K | H | -2.7266 | |
| 208 | V | H | -1.7021 | |
| 209 | D | H | -2.6138 | |
| 210 | K | H | -2.2647 | |
| 211 | K | H | -2.5577 | |
| 212 | V | H | 0.0000 | |
| 213 | E | H | -2.8497 | |
| 214 | P | H | -1.8322 | |
| 215 | K | H | -2.3118 | |
| 216 | S | H | -1.5886 | |
| 217 | C | H | -1.2027 | |
| 218 | D | H | -2.6602 | |
| 219 | K | H | -2.6966 | |
| 220 | T | H | -1.6807 | |
| 221 | H | H | -1.8819 | |
| 222 | T | H | -1.1973 | |
| 1 | D | L | -2.2229 | |
| 2 | I | L | -1.8422 | |
| 3 | Q | L | -1.9327 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3254 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.8327 | |
| 8 | P | L | -0.5972 | |
| 9 | S | L | -0.8041 | |
| 10 | S | L | -0.7807 | |
| 11 | L | L | -0.6325 | |
| 12 | S | L | -1.1294 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -1.0089 | |
| 15 | V | L | -0.1570 | |
| 16 | G | L | -0.7581 | |
| 17 | D | L | -1.8703 | |
| 18 | R | L | -2.3403 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6352 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7394 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.5146 | |
| 25 | L | L | 0.0000 | |
| 26 | T | L | -1.5836 | |
| 27 | S | L | -1.8096 | |
| 28 | E | L | -2.3234 | |
| 29 | P | L | -1.4445 | |
| 30 | S | L | -1.0185 | |
| 31 | S | L | -0.9317 | |
| 32 | G | L | -1.2478 | |
| 33 | G | L | -1.4746 | |
| 34 | I | L | 0.0000 | |
| 35 | L | L | 0.0000 | |
| 36 | S | L | 0.0000 | |
| 37 | W | L | 0.0000 | |
| 38 | Y | L | 0.0000 | |
| 39 | Q | L | 0.0000 | |
| 40 | Q | L | 0.0000 | |
| 41 | K | L | -2.0095 | |
| 42 | P | L | -1.4910 | |
| 43 | G | L | -1.8094 | |
| 44 | K | L | -2.6078 | |
| 45 | A | L | -1.6879 | |
| 46 | P | L | 0.0000 | |
| 47 | K | L | -1.2472 | |
| 48 | V | L | 0.0000 | |
| 49 | L | L | 0.0000 | |
| 50 | I | L | 0.0000 | |
| 51 | Y | L | -0.5257 | |
| 52 | G | L | 0.0000 | |
| 53 | P | L | -1.3157 | |
| 54 | N | L | -1.8914 | |
| 55 | L | L | -1.3236 | |
| 56 | E | L | -1.9615 | |
| 57 | K | L | -1.5843 | |
| 58 | P | L | -0.7308 | |
| 59 | S | L | -0.7406 | |
| 60 | G | L | -0.6444 | |
| 61 | V | L | -0.5499 | |
| 62 | P | L | -0.4522 | |
| 63 | S | L | -0.5570 | |
| 64 | R | L | -0.7253 | |
| 65 | F | L | 0.0000 | |
| 66 | S | L | -0.6050 | |
| 67 | G | L | -0.6795 | |
| 68 | S | L | -0.7897 | |
| 69 | G | L | -1.0593 | |
| 70 | S | L | -1.2766 | |
| 71 | G | L | -1.4711 | |
| 72 | T | L | -1.7566 | |
| 73 | D | L | -1.8595 | |
| 74 | Y | L | -0.9538 | |
| 75 | T | L | -0.5909 | |
| 76 | L | L | 0.0000 | |
| 77 | T | L | -0.5707 | |
| 78 | I | L | 0.0000 | |
| 79 | S | L | -1.2687 | |
| 80 | S | L | -1.1494 | |
| 81 | L | L | 0.0000 | |
| 82 | Q | L | -1.0020 | |
| 83 | P | L | -1.5572 | |
| 84 | E | L | -2.0624 | |
| 85 | D | L | 0.0000 | |
| 86 | F | L | 0.0000 | |
| 87 | A | L | 0.0000 | |
| 88 | T | L | -0.8371 | |
| 89 | Y | L | 0.0000 | |
| 90 | Y | L | 0.0000 | |
| 91 | C | L | 0.0000 | |
| 92 | A | L | 0.0000 | |
| 93 | Y | L | 0.0000 | |
| 94 | S | L | 0.0000 | |
| 95 | K | L | -2.3039 | |
| 96 | K | L | -2.4707 | |
| 97 | K | L | -1.6600 | |
| 98 | L | L | 0.0000 | |
| 99 | T | L | -1.0207 | |
| 100 | F | L | -0.3883 | |
| 101 | G | L | 0.0000 | |
| 102 | Q | L | -1.6344 | |
| 103 | G | L | 0.0000 | |
| 104 | T | L | 0.0000 | |
| 105 | K | L | -1.3578 | |
| 106 | V | L | 0.0000 | |
| 107 | E | L | -1.2827 | |
| 108 | I | L | 0.0000 | |
| 109 | K | L | -1.7150 | |
| 110 | R | L | -0.9898 | |
| 111 | T | L | -0.1557 | |
| 112 | V | L | 0.2398 | |
| 113 | A | L | -0.0589 | |
| 114 | A | L | -0.0958 | |
| 115 | P | L | 0.0000 | |
| 116 | S | L | -0.2348 | |
| 117 | V | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | I | L | 0.0000 | |
| 120 | F | L | 0.0000 | |
| 121 | P | L | -0.6721 | |
| 122 | P | L | 0.0000 | |
| 123 | S | L | -1.7719 | |
| 124 | D | L | -3.0300 | |
| 125 | E | L | -2.8403 | |
| 126 | Q | L | 0.0000 | |
| 127 | L | L | -2.2108 | |
| 128 | K | L | -2.7829 | |
| 129 | S | L | -1.7509 | |
| 130 | G | L | -1.2654 | |
| 131 | T | L | -0.9850 | |
| 132 | A | L | 0.0000 | |
| 133 | S | L | 0.0000 | |
| 134 | V | L | 0.0000 | |
| 135 | V | L | 0.0000 | |
| 136 | C | L | 0.0000 | |
| 137 | L | L | 0.0000 | |
| 138 | L | L | 0.0000 | |
| 139 | N | L | 0.0000 | |
| 140 | N | L | -0.7783 | |
| 141 | F | L | 0.0000 | |
| 142 | Y | L | 0.0000 | |
| 143 | P | L | -1.8321 | |
| 144 | R | L | -3.0857 | |
| 145 | E | L | -3.2677 | |
| 146 | A | L | -2.3665 | |
| 147 | K | L | -2.4416 | |
| 148 | V | L | 0.0000 | |
| 149 | Q | L | -0.6888 | |
| 150 | W | L | 0.0000 | |
| 151 | K | L | -0.4808 | |
| 152 | V | L | 0.0000 | |
| 153 | D | L | -1.2982 | |
| 154 | N | L | -1.2588 | |
| 155 | A | L | -0.1956 | |
| 156 | L | L | 0.6012 | |
| 157 | Q | L | -0.2638 | |
| 158 | S | L | -0.4589 | |
| 159 | G | L | -0.8680 | |
| 160 | N | L | -0.7644 | |
| 161 | S | L | -0.9937 | |
| 162 | Q | L | -1.1027 | |
| 163 | E | L | -1.4140 | |
| 164 | S | L | -0.7051 | |
| 165 | V | L | -0.6392 | |
| 166 | T | L | -0.9934 | |
| 167 | E | L | -1.9864 | |
| 168 | Q | L | 0.0000 | |
| 169 | D | L | -1.9563 | |
| 170 | S | L | -2.2170 | |
| 171 | K | L | -2.4987 | |
| 172 | D | L | -1.6731 | |
| 173 | S | L | 0.0000 | |
| 174 | T | L | 0.0000 | |
| 175 | Y | L | 0.0000 | |
| 176 | S | L | 0.0000 | |
| 177 | L | L | 0.0000 | |
| 178 | S | L | 0.0000 | |
| 179 | S | L | 0.0000 | |
| 180 | T | L | -0.5477 | |
| 181 | L | L | 0.0000 | |
| 182 | T | L | -0.3744 | |
| 183 | L | L | -0.6077 | |
| 184 | S | L | -0.9977 | |
| 185 | K | L | -1.9672 | |
| 186 | A | L | -1.8606 | |
| 187 | D | L | -2.4726 | |
| 188 | Y | L | 0.0000 | |
| 189 | E | L | -3.5910 | |
| 190 | K | L | -3.5147 | |
| 191 | H | L | -2.7888 | |
| 192 | K | L | -2.8659 | |
| 193 | V | L | -1.4492 | |
| 194 | Y | L | 0.0000 | |
| 195 | A | L | 0.0000 | |
| 196 | C | L | 0.0000 | |
| 197 | E | L | -0.6579 | |
| 198 | V | L | 0.0000 | |
| 199 | T | L | -1.2147 | |
| 200 | H | L | 0.0000 | |
| 201 | Q | L | -1.7505 | |
| 202 | G | L | -0.4233 | |
| 203 | L | L | -0.2247 | |
| 204 | S | L | -0.4524 | |
| 205 | S | L | -0.4279 | |
| 206 | P | L | -0.5485 | |
| 207 | V | L | -0.0035 | |
| 208 | T | L | -0.4164 | |
| 209 | K | L | -0.8024 | |
| 210 | S | L | -0.7963 | |
| 211 | F | L | 0.0000 | |
| 212 | N | L | -1.9177 | |
| 213 | R | L | -3.0129 | |
| 214 | G | L | -2.3395 | |
| 215 | E | L | -2.1995 | |
| 216 | C | L | -1.0987 |