| Chain sequence(s) |
H: QIQLVQSGPELKKPGETVKISCKASGYTFTNSGMNWVKQAPGKGLKWMGWIHPNTGEPTYTEEFKGRFAFSLETSATTAYLQINNLKNEDTATYFCARDYRDYFDYWGQGTTLTVSS
L: DIVMTQSPATLSVTPGDRVSLSCRASQSISDYLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGSDFTLSINSVEPEDVGVYYCQNGHSFPPTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:51)
[INFO] Main: Simulation completed successfully. (00:01:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3776 | |
| 2 | I | H | -0.7388 | |
| 3 | Q | H | -1.0096 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.2525 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.6835 | |
| 8 | G | H | -0.7578 | |
| 9 | P | H | -0.4705 | |
| 11 | E | H | -0.3252 | |
| 12 | L | H | 0.6473 | |
| 13 | K | H | -1.0504 | |
| 14 | K | H | -2.4162 | |
| 15 | P | H | -2.6803 | |
| 16 | G | H | -2.3985 | |
| 17 | E | H | -2.0110 | |
| 18 | T | H | -1.8481 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.8931 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.5214 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.9522 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7576 | |
| 27 | G | H | -0.9039 | |
| 28 | Y | H | -0.5335 | |
| 29 | T | H | -0.4338 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.2432 | |
| 36 | N | H | -1.5930 | |
| 37 | S | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | -0.9807 | |
| 44 | Q | H | -1.2324 | |
| 45 | A | H | -1.4548 | |
| 46 | P | H | -1.2675 | |
| 47 | G | H | -1.4589 | |
| 48 | K | H | -2.4033 | |
| 49 | G | H | -1.6382 | |
| 50 | L | H | 0.0000 | |
| 51 | K | H | -1.7992 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | W | H | -0.0485 | |
| 56 | I | H | 0.0000 | |
| 57 | H | H | -1.4897 | |
| 58 | P | H | 0.0000 | |
| 59 | N | H | -2.0696 | |
| 62 | T | H | -1.4634 | |
| 63 | G | H | -1.7096 | |
| 64 | E | H | -2.2518 | |
| 65 | P | H | -0.9954 | |
| 66 | T | H | -0.5708 | |
| 67 | Y | H | -0.8710 | |
| 68 | T | H | 0.0000 | |
| 69 | E | H | -3.2124 | |
| 70 | E | H | -3.2802 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.0610 | |
| 74 | G | H | -1.9700 | |
| 75 | R | H | -1.7085 | |
| 76 | F | H | 0.0000 | |
| 77 | A | H | -0.7692 | |
| 78 | F | H | 0.0000 | |
| 79 | S | H | -0.6860 | |
| 80 | L | H | -0.6277 | |
| 81 | E | H | -1.0375 | |
| 82 | T | H | -0.8803 | |
| 83 | S | H | -0.4899 | |
| 84 | A | H | -0.5968 | |
| 85 | T | H | -0.6446 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.4957 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1233 | |
| 91 | I | H | 0.0000 | |
| 92 | N | H | -1.8212 | |
| 93 | N | H | -2.4347 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -3.2835 | |
| 96 | N | H | -3.1046 | |
| 97 | E | H | -2.8680 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -1.2324 | |
| 100 | A | H | 0.0000 | |
| 101 | T | H | -0.4323 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.3490 | |
| 107 | D | H | -0.6352 | |
| 108 | Y | H | -0.4244 | |
| 109 | R | H | -1.6882 | |
| 113 | D | H | -1.0588 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.1815 | |
| 117 | Y | H | 0.1452 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2733 | |
| 121 | G | H | -0.8234 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.3686 | |
| 124 | L | H | 0.0000 | |
| 125 | T | H | -0.6090 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -1.1500 | |
| 128 | S | H | -0.9633 | |
| 1 | D | L | -1.1716 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.6998 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.6279 | |
| 6 | Q | L | -0.6774 | |
| 7 | S | L | -0.7222 | |
| 8 | P | L | -0.3444 | |
| 9 | A | L | -0.3307 | |
| 10 | T | L | -0.4002 | |
| 11 | L | L | -0.2792 | |
| 12 | S | L | -0.5999 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -1.4475 | |
| 15 | P | L | -1.6519 | |
| 16 | G | L | -1.8227 | |
| 17 | D | L | -2.2386 | |
| 18 | R | L | -2.8061 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.8470 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.9287 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3565 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.9983 | |
| 27 | Q | L | -1.7283 | |
| 28 | S | L | -1.5447 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -1.1335 | |
| 37 | D | L | -1.3919 | |
| 38 | Y | L | -0.5947 | |
| 39 | L | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.6675 | |
| 45 | K | L | -0.8939 | |
| 46 | S | L | -0.8861 | |
| 47 | H | L | -1.6744 | |
| 48 | E | L | -1.6628 | |
| 49 | S | L | -1.0937 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -0.5903 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | K | L | -0.5467 | |
| 56 | Y | L | -0.7326 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.9741 | |
| 66 | Q | L | -1.0814 | |
| 67 | S | L | -0.7103 | |
| 68 | I | L | -0.3052 | |
| 69 | S | L | -0.2852 | |
| 70 | G | L | -0.4487 | |
| 71 | I | L | -0.1638 | |
| 72 | P | L | -0.2640 | |
| 74 | S | L | -0.5757 | |
| 75 | R | L | -1.2004 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.8208 | |
| 78 | G | L | -0.6067 | |
| 79 | S | L | -0.9228 | |
| 80 | G | L | -1.3354 | |
| 83 | S | L | -1.3652 | |
| 84 | G | L | -1.4297 | |
| 85 | S | L | -1.9978 | |
| 86 | D | L | -2.4627 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.8473 | |
| 89 | L | L | 0.0000 | |
| 90 | S | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -2.5025 | |
| 93 | S | L | -2.1603 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.7799 | |
| 96 | P | L | -1.1706 | |
| 97 | E | L | -0.9615 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | 0.2034 | |
| 100 | G | L | -0.2124 | |
| 101 | V | L | -0.0403 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | N | L | 0.0000 | |
| 107 | G | L | -0.5497 | |
| 108 | H | L | -0.5635 | |
| 109 | S | L | 0.0473 | |
| 114 | F | L | 1.1485 | |
| 115 | P | L | 0.0542 | |
| 116 | P | L | 0.0100 | |
| 117 | T | L | -0.1943 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.8864 | |
| 121 | G | L | -0.7149 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.7266 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.4881 | |
| 126 | I | L | -0.6656 | |
| 127 | K | L | -1.6500 |