| Chain sequence(s) |
A: IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNQGALLYSIANQPVSVVLQAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGPNYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVKN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | IL1A |
| Energy difference between WT (input) and mutated protein (by FoldX) | -0.106258 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:01:07)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:10)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:05)
[INFO] Main: Simulation completed successfully. (00:02:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.3027 | mutated: IL1A |
| 2 | P | A | -0.0370 | |
| 3 | E | A | -1.0782 | |
| 4 | Y | A | 0.2450 | |
| 5 | V | A | 0.0000 | |
| 6 | D | A | -1.6629 | |
| 7 | W | A | -1.7701 | |
| 8 | R | A | -2.4868 | |
| 9 | Q | A | -2.7732 | |
| 10 | K | A | -2.8437 | |
| 11 | G | A | -1.8029 | |
| 12 | A | A | 0.0000 | |
| 13 | V | A | -0.7755 | |
| 14 | T | A | 0.0000 | |
| 15 | P | A | -0.3432 | |
| 16 | V | A | -0.4341 | |
| 17 | K | A | -0.8453 | |
| 18 | N | A | -1.5617 | |
| 19 | Q | A | -1.1692 | |
| 20 | G | A | -1.1976 | |
| 21 | S | A | -0.6780 | |
| 22 | C | A | 0.0000 | |
| 23 | G | A | -0.7339 | |
| 24 | S | A | 0.0000 | |
| 25 | C | A | -0.4290 | |
| 26 | W | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | F | A | 0.0000 | |
| 29 | S | A | 0.0000 | |
| 30 | A | A | 0.0000 | |
| 31 | V | A | 0.0000 | |
| 32 | V | A | 0.0000 | |
| 33 | T | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | E | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | I | A | 0.0000 | |
| 38 | I | A | 0.0000 | |
| 39 | K | A | -1.3099 | |
| 40 | I | A | -1.2484 | |
| 41 | R | A | -2.3436 | |
| 42 | T | A | -1.6489 | |
| 43 | G | A | -1.5553 | |
| 44 | N | A | -1.6126 | |
| 45 | L | A | -0.3488 | |
| 46 | N | A | -0.4714 | |
| 47 | Q | A | -0.6797 | |
| 48 | Y | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | E | A | 0.0000 | |
| 51 | Q | A | 0.0000 | |
| 52 | E | A | 0.0000 | |
| 53 | L | A | 0.0000 | |
| 54 | L | A | 0.0000 | |
| 55 | D | A | 0.0000 | |
| 56 | C | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | R | A | -2.3580 | |
| 59 | R | A | -2.3870 | |
| 60 | S | A | 0.0000 | |
| 61 | Y | A | -0.1260 | |
| 62 | G | A | 0.0000 | |
| 63 | C | A | -0.6680 | |
| 64 | N | A | -1.0525 | |
| 65 | G | A | -0.6088 | |
| 66 | G | A | -0.4169 | |
| 67 | Y | A | 0.3547 | |
| 68 | P | A | 0.0000 | |
| 69 | W | A | 0.1569 | |
| 70 | S | A | 0.0000 | |
| 71 | A | A | 0.0000 | |
| 72 | L | A | 0.0000 | |
| 73 | Q | A | -0.9774 | |
| 74 | L | A | -0.6160 | |
| 75 | V | A | 0.0000 | |
| 76 | A | A | -1.4738 | |
| 77 | Q | A | -1.4537 | |
| 78 | Y | A | -0.4538 | |
| 79 | G | A | 0.0000 | |
| 80 | I | A | 0.0000 | |
| 81 | H | A | 0.0000 | |
| 82 | Y | A | -0.1577 | |
| 83 | R | A | -0.9065 | |
| 84 | N | A | -1.3881 | |
| 85 | T | A | -0.8654 | |
| 86 | Y | A | 0.0000 | |
| 87 | P | A | -1.1651 | |
| 88 | Y | A | -1.3256 | |
| 89 | E | A | -2.0039 | |
| 90 | G | A | -1.3114 | |
| 91 | V | A | -0.8423 | |
| 92 | Q | A | -1.5619 | |
| 93 | R | A | -1.6752 | |
| 94 | Y | A | -0.0464 | |
| 95 | C | A | -1.0824 | |
| 96 | R | A | -2.2949 | |
| 97 | S | A | 0.0000 | |
| 98 | R | A | -3.2295 | |
| 99 | E | A | -3.5508 | |
| 100 | K | A | -2.7637 | |
| 101 | G | A | -1.9588 | |
| 102 | P | A | -0.9173 | |
| 103 | Y | A | -0.2119 | |
| 104 | A | A | -0.0000 | |
| 105 | A | A | 0.0000 | |
| 106 | K | A | -1.5730 | |
| 107 | T | A | 0.0000 | |
| 108 | D | A | -2.5167 | |
| 109 | G | A | -1.7332 | |
| 110 | V | A | -1.2269 | |
| 111 | R | A | -2.2042 | |
| 112 | Q | A | -2.0748 | |
| 113 | V | A | -1.3149 | |
| 114 | Q | A | -1.7479 | |
| 115 | P | A | -0.7140 | |
| 116 | Y | A | -0.1849 | |
| 117 | N | A | -1.1334 | |
| 118 | Q | A | -0.8054 | |
| 119 | G | A | -0.3869 | |
| 120 | A | A | -0.1988 | |
| 121 | L | A | 0.0000 | |
| 122 | L | A | 0.0000 | |
| 123 | Y | A | 1.2264 | |
| 124 | S | A | 0.0000 | |
| 125 | I | A | 0.0000 | |
| 126 | A | A | 0.1836 | |
| 127 | N | A | -0.7379 | |
| 128 | Q | A | -0.4318 | |
| 129 | P | A | 0.0000 | |
| 130 | V | A | 0.0000 | |
| 131 | S | A | 0.0000 | |
| 132 | V | A | 0.0000 | |
| 133 | V | A | 0.0000 | |
| 134 | L | A | 0.0000 | |
| 135 | Q | A | -1.2522 | |
| 136 | A | A | 0.0000 | |
| 137 | A | A | -1.1718 | |
| 138 | G | A | -1.7527 | |
| 139 | K | A | -2.4213 | |
| 140 | D | A | -2.0949 | |
| 141 | F | A | 0.0000 | |
| 142 | Q | A | -1.7273 | |
| 143 | L | A | -0.8644 | |
| 144 | Y | A | 0.0000 | |
| 145 | R | A | -2.8769 | |
| 146 | G | A | -2.0776 | |
| 147 | G | A | -0.6572 | |
| 148 | I | A | 0.7468 | |
| 149 | F | A | 0.0000 | |
| 150 | V | A | 1.5308 | |
| 151 | G | A | 0.3155 | |
| 152 | P | A | -0.2057 | |
| 153 | C | A | -0.6372 | |
| 154 | G | A | -1.0851 | |
| 155 | N | A | -1.9841 | |
| 156 | K | A | -2.4185 | |
| 157 | V | A | -1.3387 | |
| 158 | D | A | -1.5448 | |
| 159 | H | A | 0.0000 | |
| 160 | A | A | 0.0000 | |
| 161 | V | A | 0.0000 | |
| 162 | A | A | 0.0000 | |
| 163 | A | A | 0.0000 | |
| 164 | V | A | 0.0000 | |
| 165 | G | A | 0.0000 | |
| 166 | Y | A | 0.0000 | |
| 167 | G | A | 0.0000 | |
| 168 | P | A | -1.0713 | |
| 169 | N | A | -1.5100 | |
| 170 | Y | A | -0.7199 | |
| 171 | I | A | 0.0000 | |
| 172 | L | A | 0.0000 | |
| 173 | I | A | 0.0000 | |
| 174 | K | A | 0.0000 | |
| 175 | N | A | 0.0000 | |
| 176 | S | A | 0.0000 | |
| 177 | W | A | -0.8455 | |
| 178 | G | A | -1.0695 | |
| 179 | T | A | -1.6298 | |
| 180 | G | A | -1.6263 | |
| 181 | W | A | 0.0000 | |
| 182 | G | A | -2.3961 | |
| 183 | E | A | -3.3651 | |
| 184 | N | A | -2.6300 | |
| 185 | G | A | 0.0000 | |
| 186 | Y | A | 0.0000 | |
| 187 | I | A | 0.0000 | |
| 188 | R | A | -0.7584 | |
| 189 | I | A | 0.0000 | |
| 190 | K | A | -0.6874 | |
| 191 | R | A | -1.1744 | |
| 192 | G | A | -1.4155 | |
| 193 | T | A | -0.9515 | |
| 194 | G | A | -1.0813 | |
| 195 | N | A | -1.1563 | |
| 196 | S | A | -0.5985 | |
| 197 | Y | A | -0.0032 | |
| 198 | G | A | 0.0000 | |
| 199 | V | A | -0.0659 | |
| 200 | C | A | 0.0000 | |
| 201 | G | A | 0.0000 | |
| 202 | L | A | 0.0000 | |
| 203 | Y | A | 0.0000 | |
| 204 | T | A | -0.2605 | |
| 205 | S | A | -0.1603 | |
| 206 | S | A | 0.0000 | |
| 207 | F | A | -0.7029 | |
| 208 | Y | A | 0.0000 | |
| 209 | P | A | 0.0000 | |
| 210 | V | A | -1.1782 | |
| 211 | K | A | -1.8437 | |
| 212 | N | A | -2.1011 |