| Chain sequence(s) |
A: SSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEKTLSLPANQPIALTKLSLNISPDDRVKIVVTVSDGQSLHLSQQWPP
B: LVFFAEDVGSNKGAIIGLMVGGVVIA input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:53)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | S | A | 0.7571 | |
| 4 | S | A | 0.0000 | |
| 5 | Q | A | 0.4561 | |
| 6 | I | A | 0.0000 | |
| 7 | T | A | 0.0000 | |
| 8 | F | A | 0.0000 | |
| 9 | N | A | -1.4077 | |
| 10 | T | A | -0.8649 | |
| 11 | T | A | -0.9107 | |
| 12 | Q | A | -2.1202 | |
| 13 | Q | A | -2.3913 | |
| 14 | G | A | -2.2207 | |
| 15 | D | A | -2.7114 | |
| 16 | M | A | -1.8206 | |
| 17 | Y | A | -1.4530 | |
| 18 | T | A | -1.2909 | |
| 19 | I | A | 0.0000 | |
| 20 | I | A | -0.7538 | |
| 21 | P | A | 0.0000 | |
| 22 | E | A | -0.3724 | |
| 23 | V | A | 0.0000 | |
| 24 | T | A | 0.0000 | |
| 25 | L | A | 0.0000 | |
| 26 | T | A | 0.3896 | |
| 27 | Q | A | -0.9193 | |
| 28 | S | A | -0.7613 | |
| 29 | C | A | 0.0974 | |
| 30 | L | A | 1.1306 | |
| 31 | C | A | 0.0000 | |
| 32 | R | A | -1.2683 | |
| 33 | V | A | 0.0000 | |
| 34 | Q | A | -2.1152 | |
| 35 | I | A | 0.0000 | |
| 36 | L | A | -1.0803 | |
| 37 | S | A | 0.0000 | |
| 38 | L | A | -1.2066 | |
| 39 | R | A | 0.0000 | |
| 40 | E | A | -2.2424 | |
| 41 | G | A | -2.0226 | |
| 42 | S | A | -1.2961 | |
| 43 | S | A | -1.0488 | |
| 44 | G | A | -1.3024 | |
| 45 | Q | A | -2.1251 | |
| 46 | S | A | -1.4564 | |
| 47 | Q | A | -1.6944 | |
| 48 | T | A | -1.4904 | |
| 49 | K | A | -2.7676 | |
| 50 | Q | A | -3.0769 | |
| 51 | E | A | -3.3570 | |
| 52 | K | A | -2.1051 | |
| 53 | T | A | -0.8044 | |
| 54 | L | A | 0.2020 | |
| 55 | S | A | 0.4053 | |
| 56 | L | A | 0.0000 | |
| 57 | P | A | -0.5215 | |
| 58 | A | A | -0.4685 | |
| 59 | N | A | 0.4806 | |
| 60 | Q | A | -0.3091 | |
| 61 | P | A | 0.2073 | |
| 62 | I | A | 0.2175 | |
| 63 | A | A | -0.1771 | |
| 64 | L | A | -0.2018 | |
| 65 | T | A | -0.8754 | |
| 66 | K | A | -1.7495 | |
| 67 | L | A | 0.0000 | |
| 68 | S | A | -0.8984 | |
| 69 | L | A | 0.0000 | |
| 70 | N | A | -1.9968 | |
| 71 | I | A | -1.7914 | |
| 72 | S | A | -1.7440 | |
| 73 | P | A | -1.7902 | |
| 74 | D | A | -2.5789 | |
| 75 | D | A | 0.0000 | |
| 76 | R | A | -2.7467 | |
| 77 | V | A | -1.8614 | |
| 78 | K | A | -0.8340 | |
| 79 | I | A | 0.0000 | |
| 80 | V | A | 0.0158 | |
| 81 | V | A | 0.0000 | |
| 82 | T | A | -0.4970 | |
| 83 | V | A | 0.0000 | |
| 84 | S | A | -1.2803 | |
| 85 | D | A | -1.6847 | |
| 86 | G | A | -1.6800 | |
| 87 | Q | A | -1.9379 | |
| 88 | S | A | -1.2388 | |
| 89 | L | A | -1.0988 | |
| 90 | H | A | -1.0669 | |
| 91 | L | A | 0.0000 | |
| 92 | S | A | 0.3816 | |
| 93 | Q | A | 0.0000 | |
| 94 | Q | A | 0.4131 | |
| 95 | W | A | 0.0000 | |
| 96 | P | A | 0.0000 | |
| 97 | P | A | -0.0008 | |
| 17 | L | B | 2.2431 | |
| 18 | V | B | 2.7425 | |
| 19 | F | B | 1.7815 | |
| 20 | F | B | 1.0879 | |
| 21 | A | B | -0.0808 | |
| 22 | E | B | -1.6500 | |
| 23 | D | B | -1.1554 | |
| 24 | V | B | -0.3155 | |
| 25 | G | B | -1.1312 | |
| 26 | S | B | -1.0977 | |
| 27 | N | B | -1.9227 | |
| 28 | K | B | -1.7875 | |
| 29 | G | B | -0.5609 | |
| 30 | A | B | 0.4874 | |
| 31 | I | B | 2.0273 | |
| 32 | I | B | 1.4724 | |
| 33 | G | B | 1.2485 | |
| 34 | L | B | 2.1388 | |
| 35 | M | B | 1.5756 | |
| 36 | V | B | 1.6898 | |
| 37 | G | B | 0.6218 | |
| 38 | G | B | 0.7346 | |
| 39 | V | B | 1.4151 | |
| 40 | V | B | 2.6239 | |
| 41 | I | B | 2.8007 | |
| 42 | A | B | 1.5220 |