| Chain sequence(s) |
L: KAITEYLGFEMLDD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:35)
[INFO] Main: Simulation completed successfully. (00:00:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 19 | K | L | -1.6906 | |
| 20 | A | L | 0.1166 | |
| 21 | I | L | 2.1579 | |
| 22 | T | L | 0.0298 | |
| 23 | E | L | -1.3666 | |
| 24 | Y | L | 1.4719 | |
| 25 | L | L | 1.6983 | |
| 26 | G | L | 0.1776 | |
| 27 | F | L | 1.3260 | |
| 28 | E | L | -1.3545 | |
| 29 | M | L | 0.6033 | |
| 30 | L | L | 1.2811 | |
| 31 | D | L | -1.6027 | |
| 32 | D | L | -0.7103 |