Project name: lanm_B1

Status: done

Started: 2026-07-27 01:21:08
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Chain sequence(s) A: ASGADALKALNKDNDDSLEIAEVIHAGATTFTAINPDGDTTLESGETKGRLTEKDWARANKDGDQTLEMDEWLKILKTRFKRADANKDGKLTAAELDSKAGQGVLVMIMK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:01)
Show buried residues

Minimal score value
-4.0426
Maximal score value
0.0
Average score
-1.5147
Total score value
-166.6182

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.9934
2 S A -1.3443
3 G A 0.0000
4 A A -1.6787
5 D A -2.2250
6 A A 0.0000
7 L A -2.3556
8 K A -2.8237
9 A A -1.3093
10 L A -1.5463
11 N A 0.0000
12 K A -3.6513
13 D A -3.9719
14 N A -4.0426
15 D A -3.5870
16 D A -3.6113
17 S A 0.0000
18 L A 0.0000
19 E A -1.7643
20 I A -0.4337
21 A A -0.2881
22 E A -1.0144
23 V A 0.0000
24 I A -0.3940
25 H A -0.6443
26 A A 0.0000
27 G A 0.0000
28 A A -0.3653
29 T A -0.2237
30 T A 0.0000
31 F A 0.0000
32 T A -0.4316
33 A A -0.1986
34 I A -0.5926
35 N A 0.0000
36 P A -1.4397
37 D A -2.5129
38 G A -2.0462
39 D A -2.2456
40 T A -1.3790
41 T A -1.8869
42 L A 0.0000
43 E A -2.6771
44 S A -2.2143
45 G A -2.0018
46 E A -1.7120
47 T A 0.0000
48 K A -2.7466
49 G A -1.8024
50 R A -1.2922
51 L A 0.0000
52 T A -2.3668
53 E A -3.4845
54 K A -3.2956
55 D A -2.4893
56 W A 0.0000
57 A A -2.8079
58 R A -3.3077
59 A A -2.9066
60 N A 0.0000
61 K A -3.5570
62 D A -3.6820
63 G A -3.1760
64 D A -3.3147
65 Q A -3.0552
66 T A -2.5391
67 L A 0.0000
68 E A -2.2903
69 M A -1.3165
70 D A -2.3548
71 E A -2.4634
72 W A 0.0000
73 L A -1.5119
74 K A -2.1852
75 I A -1.3848
76 L A 0.0000
77 K A -2.0400
78 T A -1.9469
79 R A -1.9791
80 F A 0.0000
81 K A -3.6078
82 R A -3.4811
83 A A 0.0000
84 D A 0.0000
85 A A -2.2048
86 N A -2.9851
87 K A -3.6842
88 D A -3.0472
89 G A -2.3218
90 K A -2.3732
91 L A 0.0000
92 T A -1.2283
93 A A -1.0316
94 A A -0.6593
95 E A -1.5051
96 L A 0.0000
97 D A -2.3030
98 S A -1.9348
99 K A -2.5475
100 A A -2.1004
101 G A 0.0000
102 Q A -1.4502
103 G A -1.0130
104 V A 0.0000
105 L A 0.0000
106 V A -0.0280
107 M A 0.0000
108 I A 0.0000
109 M A -0.6887
110 K A -1.5201
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Laboratory of Theory of Biopolymers 2018